Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03-
01] 44 sequences; 16,719,687 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq9 140 4e-28
seq1 114 2e-20
>seq9
Length=795436
Score = 140 bits (154), Expect = 4e-28
Identities = 450/696 (65%), Gaps = 23/696 (3%)
Strand=Plus/Minus
Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457
|| |||||||| ||||| || ||||| | ||| || ||||| | ||||||||| ||
Sbjct 376098 AAGTTTGAAGATATGGGCGTGGGTGGTTTGGATGCTGAGTTTTCGCAGATTTTCAGAAGA 376039
Query 164458 GCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAACATATA 164517
||||| || || ||| ||||| | | ||| | || || || || ||| ||
Sbjct 376038 GCATTCGCGTCCAGAATCTTTCCTCCGGGCTTGATAGACAAGTTGGGGATCAACCATGTA 375979
Query 164518 AAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCATT 164577
|| ||| | ||| | | || ||||||||| |||||||| || || || || |||
Sbjct 375978 AAGGGATTGTTACTTTACGGTCCTCCTGGTACTGGTAAAACGTTGATTGCCAGAAAAATT 375919
Query 164578 GCTCAAGCTTTTAAATCG------CGACCCGTTAAAATTGTTAATGGTCCTGAATTATTG 164631
| ||| | || ||| | ||| || || ||||| || ||||| ||| | |
Sbjct 375918 GG-CAAATTGTTGAATGGATCTGCCGAGCCA--AAGATTGTGAACGGTCCGGAAATCCTA 375862
Query 164632 AACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAA 164691
| |||||||| ||| || |||| ||| | | || |||||| | || || || | |
Sbjct 375861 AGTAAATATGTCGGTAGTTCTGAAGAAAATATCCGTAATTTGTTTAAAGATGCCGAGGCA 375802
Query 164692 GAACA-AAAGAAAGCAGGTTTAGCTAGTAAATTACATGTTATTGTTTTTGATGAGATAGA 164750
|| | |||| | | | | || | || ||| ||||| ||||||| || | ||
Sbjct 375801 GAGTATAAAGCCAAAAAGGAAAACTCTTCG-TTGCATATTATTATTTTTGACGAATTGGA 375743
Query 164751 TGCTCTTTGCAAAAAACGTGG------------TGATAATATTATTCATGATGCAGTGGT 164798
| || | | |||| || | || || || | | || |||| || ||
Sbjct 375742 TTCTGTATTCAAACAAAGAGGATCCAGAGGAGATGGTACTGGTGTTGGTGATAATGTTGT 375683
Query 164799 TAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTAGG 164858
||| ||||| | | ||||| ||||||||||| || || |||||||| || | ||
Sbjct 375682 TAACCAGTTATTAGCCAAAATGGATGGTGTAGATCAATTGAACAATATTTTGGTTATTGG 375623
Query 164859 TATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAATT 164918
|||||| || || |||||| |||||| ||||||| ||| |||||||| |||| ||| |
Sbjct 375622 TATGACAAATCGTATTGATTTGATTGATAATGCTTTGTTAAGACCTGGTAGATTTGAAGT 375563
Query 164919 GAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTTAAAAGTTCATGT 164978
| | ||||| || || ||| || |||| || ||||| || | |||||
Sbjct 375562 TCAGGTGGAAATCAAGTTGCCTGACGAAAAAGGCCGTAGACAAATCTTTGACATTCATTC 375503
Query 164979 GGCTAAAATGAAATCCTGTGATATATTATCTCCCGATGTAGATTTAAATAAAATAGCTGC 165038
|| |||||| | || || | ||| | ||| | ||||| || | | | || ||
Sbjct 375502 CAAGAAGATGAAAGACAGTCATTTGTTAGGTGACGACATTGATTTCAACAGACTTGCAGC 375443
Query 165039 CGAAACTAAAAATTATAGTGGTGCTGAATTAGAGGG 165074
||| ||||||| | |||||| ||| | || ||
Sbjct 375442 TTTAACCAAAAATTTTTCTGGTGCAGAAATCGAAGG 375407
>seq1
Length=3127730
Score = 114 bits (126), Expect = 2e-20
Identities = 362/551 (66%), Gaps = 25/551 (5%)
Strand=Plus/Minus
Query 6703 TGAGGATTATAATCTAACAATTCAAAATCTTCAAATTTAAAATCACATAAATTATCAG-- 6760
|| |||| |||||| | |||||| |||||||| || |||||| | ||| |||||
Sbjct 2169336 TGTGGATGATAATCGGTAATTTCAAAGTCTTCAAACTTGAAATCA--TCAAT-ATCAGTA 2169280
Query 6761 ACtttttttttAATATTACAACAGGTGAAGGTTTTATTGATCGA-GTTAATT-GTTCTTT 6818
|| ||| ||||||| || |||| ||| | || | || | ||||||| | ||||
Sbjct 2169279 ACGTTTCTTTTAATCTT-CAACTTTGGAAAGCTTCTTGGAACTCTGTTAATTTGCTCTTG 2169221
Query 6819 TATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAATAAATTCACC 6878
|| |||| || || || || | || || || || | || || || || |||||
Sbjct 2169220 TAAGGCTTCAATGTGGTCCTTGTACACGTGGGCGTCACCCATGGTGTGTATGAACTCACC 2169161
Query 6879 TGGTTTCATATCA-ACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGAAGCTACAT 6937
| ||| ||| ||| || | ||||| | | |||| | ||||| || || | ||
Sbjct 2169160 ACAGTCCATGTCACACACCTGG-GCAATCATCTTGGTTAGAAGAGCATACGACGCAATAT 2169102
Query 6938 TAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAACATTGACAAGATAAAATAT 6997
| ||||| ||||| || |||||||| ||||| || || |||| || | |
Sbjct 2169101 TGAAAGGAACACCCAAGCCCATATCGCAAGATCTCTGGTATAGGAGACACGAGAGCTGAG 2169042
Query 6998 ---TG---TCTATAG---------CATAAAATTGACACAATACATGACATGGAGGTAAAA 7042
|| ||| ||| |||| || |||| || ||||| || ||||| |
Sbjct 2169041 GTCTGCCATCTTTAGGAAAGTTTACATAGAACTGACTAAACACATGGCAAGGAGGAAGCG 2168982
Query 7043 CAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGAT 7102
| || | | ||| | ||| |||||||||| ||| | || | |||||| | || |
Sbjct 2168981 CCATCTTAGGGAAATCTGGTGGGTTCCAAGCAGACATGATGATTCTTCTATCGTACGGGT 2168922
Query 7103 TTGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTATACCCTGACCTTCATAATTAG 7162
| || || ||||| |||| ||||||||| | || || || | ||| | |
Sbjct 2168921 TGGTCTTCAATTTATGGATAACCTCCGCTAATTGATCCACGCCTTGGCCATTATAGTCGG 2168862
Query 7163 TATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTA 7222
|| |||||| | || | ||||||||||||||||| || |||||||||| ||||||||
Sbjct 2168861 CATCACAATTCTTGTATTCTGCTCCAAAATGTCTCCACTGGAACCCATAAACAGGACCTA 2168802
Query 7223 AATCACCTTCT 7233
|||| || |||
Sbjct 2168801 AATCGCCCTCT 2168791
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595871672270400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |