Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq9 140 4e-28 seq1 114 2e-20 >seq9 Length=795436 Score = 140 bits (154), Expect = 4e-28 Identities = 450/696 (65%), Gaps = 23/696 (3%) Strand=Plus/Minus Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457 || |||||||| ||||| || ||||| | ||| || ||||| | ||||||||| || Sbjct 376098 AAGTTTGAAGATATGGGCGTGGGTGGTTTGGATGCTGAGTTTTCGCAGATTTTCAGAAGA 376039 Query 164458 GCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAACATATA 164517 ||||| || || ||| ||||| | | ||| | || || || || ||| || Sbjct 376038 GCATTCGCGTCCAGAATCTTTCCTCCGGGCTTGATAGACAAGTTGGGGATCAACCATGTA 375979 Query 164518 AAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCATT 164577 || ||| | ||| | | || ||||||||| |||||||| || || || || ||| Sbjct 375978 AAGGGATTGTTACTTTACGGTCCTCCTGGTACTGGTAAAACGTTGATTGCCAGAAAAATT 375919 Query 164578 GCTCAAGCTTTTAAATCG------CGACCCGTTAAAATTGTTAATGGTCCTGAATTATTG 164631 | ||| | || ||| | ||| || || ||||| || ||||| ||| | | Sbjct 375918 GG-CAAATTGTTGAATGGATCTGCCGAGCCA--AAGATTGTGAACGGTCCGGAAATCCTA 375862 Query 164632 AACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAA 164691 | |||||||| ||| || |||| ||| | | || |||||| | || || || | | Sbjct 375861 AGTAAATATGTCGGTAGTTCTGAAGAAAATATCCGTAATTTGTTTAAAGATGCCGAGGCA 375802 Query 164692 GAACA-AAAGAAAGCAGGTTTAGCTAGTAAATTACATGTTATTGTTTTTGATGAGATAGA 164750 || | |||| | | | | || | || ||| ||||| ||||||| || | || Sbjct 375801 GAGTATAAAGCCAAAAAGGAAAACTCTTCG-TTGCATATTATTATTTTTGACGAATTGGA 375743 Query 164751 TGCTCTTTGCAAAAAACGTGG------------TGATAATATTATTCATGATGCAGTGGT 164798 | || | | |||| || | || || || | | || |||| || || Sbjct 375742 TTCTGTATTCAAACAAAGAGGATCCAGAGGAGATGGTACTGGTGTTGGTGATAATGTTGT 375683 Query 164799 TAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTAGG 164858 ||| ||||| | | ||||| ||||||||||| || || |||||||| || | || Sbjct 375682 TAACCAGTTATTAGCCAAAATGGATGGTGTAGATCAATTGAACAATATTTTGGTTATTGG 375623 Query 164859 TATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAATT 164918 |||||| || || |||||| |||||| ||||||| ||| |||||||| |||| ||| | Sbjct 375622 TATGACAAATCGTATTGATTTGATTGATAATGCTTTGTTAAGACCTGGTAGATTTGAAGT 375563 Query 164919 GAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTTAAAAGTTCATGT 164978 | | ||||| || || ||| || |||| || ||||| || | ||||| Sbjct 375562 TCAGGTGGAAATCAAGTTGCCTGACGAAAAAGGCCGTAGACAAATCTTTGACATTCATTC 375503 Query 164979 GGCTAAAATGAAATCCTGTGATATATTATCTCCCGATGTAGATTTAAATAAAATAGCTGC 165038 || |||||| | || || | ||| | ||| | ||||| || | | | || || Sbjct 375502 CAAGAAGATGAAAGACAGTCATTTGTTAGGTGACGACATTGATTTCAACAGACTTGCAGC 375443 Query 165039 CGAAACTAAAAATTATAGTGGTGCTGAATTAGAGGG 165074 ||| ||||||| | |||||| ||| | || || Sbjct 375442 TTTAACCAAAAATTTTTCTGGTGCAGAAATCGAAGG 375407 >seq1 Length=3127730 Score = 114 bits (126), Expect = 2e-20 Identities = 362/551 (66%), Gaps = 25/551 (5%) Strand=Plus/Minus Query 6703 TGAGGATTATAATCTAACAATTCAAAATCTTCAAATTTAAAATCACATAAATTATCAG-- 6760 || |||| |||||| | |||||| |||||||| || |||||| | ||| ||||| Sbjct 2169336 TGTGGATGATAATCGGTAATTTCAAAGTCTTCAAACTTGAAATCA--TCAAT-ATCAGTA 2169280 Query 6761 ACtttttttttAATATTACAACAGGTGAAGGTTTTATTGATCGA-GTTAATT-GTTCTTT 6818 || ||| ||||||| || |||| ||| | || | || | ||||||| | |||| Sbjct 2169279 ACGTTTCTTTTAATCTT-CAACTTTGGAAAGCTTCTTGGAACTCTGTTAATTTGCTCTTG 2169221 Query 6819 TATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAATAAATTCACC 6878 || |||| || || || || | || || || || | || || || || ||||| Sbjct 2169220 TAAGGCTTCAATGTGGTCCTTGTACACGTGGGCGTCACCCATGGTGTGTATGAACTCACC 2169161 Query 6879 TGGTTTCATATCA-ACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGAAGCTACAT 6937 | ||| ||| ||| || | ||||| | | |||| | ||||| || || | || Sbjct 2169160 ACAGTCCATGTCACACACCTGG-GCAATCATCTTGGTTAGAAGAGCATACGACGCAATAT 2169102 Query 6938 TAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAACATTGACAAGATAAAATAT 6997 | ||||| ||||| || |||||||| ||||| || || |||| || | | Sbjct 2169101 TGAAAGGAACACCCAAGCCCATATCGCAAGATCTCTGGTATAGGAGACACGAGAGCTGAG 2169042 Query 6998 ---TG---TCTATAG---------CATAAAATTGACACAATACATGACATGGAGGTAAAA 7042 || ||| ||| |||| || |||| || ||||| || ||||| | Sbjct 2169041 GTCTGCCATCTTTAGGAAAGTTTACATAGAACTGACTAAACACATGGCAAGGAGGAAGCG 2168982 Query 7043 CAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGAT 7102 | || | | ||| | ||| |||||||||| ||| | || | |||||| | || | Sbjct 2168981 CCATCTTAGGGAAATCTGGTGGGTTCCAAGCAGACATGATGATTCTTCTATCGTACGGGT 2168922 Query 7103 TTGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTATACCCTGACCTTCATAATTAG 7162 | || || ||||| |||| ||||||||| | || || || | ||| | | Sbjct 2168921 TGGTCTTCAATTTATGGATAACCTCCGCTAATTGATCCACGCCTTGGCCATTATAGTCGG 2168862 Query 7163 TATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTA 7222 || |||||| | || | ||||||||||||||||| || |||||||||| |||||||| Sbjct 2168861 CATCACAATTCTTGTATTCTGCTCCAAAATGTCTCCACTGGAACCCATAAACAGGACCTA 2168802 Query 7223 AATCACCTTCT 7233 |||| || ||| Sbjct 2168801 AATCGCCCTCT 2168791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595871672270400