Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq2 141 1e-29 seq11 129 9e-26 seq7 127 3e-25 seq4 120 5e-23 >seq2 Length=1906241 Score = 141 bits (156), Expect = 1e-29 Identities = 197/271 (73%), Gaps = 4/271 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||||||||||||| | | ||||| | |||||||||| ||||| || ||||||||||||| Sbjct 737506 CGCTAAGCGTCATAGAAAGATCT-TGAGAGATAACATTCAAGGTATAACCAAGCCAGCTA 737564 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 | | | |||| | | ||||| || |||||| | || |||||| |||||||||| Sbjct 737565 TTAGAAGATTGGCAAGAAGAGGTGGTGTTAAGCGTATTTCCGGATTGATCTATGAAGAAG 737624 Query 16551 TTCGTGATGTTTTGAAGATC-TTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACC 16609 | | | |||||||| ||| || | | | ||| ||| || ||| | || || Sbjct 737625 TCAGAGGCGTTTTGAA-ATCGTTTTTGGAAAACGTCATCAGAGACGCTGTTACTTACACT 737683 Query 16610 GAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAA 16669 || || ||||| | ||||||||||| || ||||| |||||||||| |||||| | ||| Sbjct 737684 GAACATGCTAAGAGAAAGACTGTCACTTCTTTGGATGTCGTCTATGCTTTGAAAAGACAA 737743 Query 16670 GGCCGTAAGATTTATGGTTTTGGAAGTTAAT 16700 || | | | |||||||| ||| |||||| Sbjct 737744 GGAAGAACCTTGTATGGTTTCGGAGGTTAAT 737774 Score = 141 bits (156), Expect = 1e-29 Identities = 177/240 (74%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||||||| | | ||||| | |||||||||| ||||| || |||||||||||||| Sbjct 1829178 GCTAAGCGTCATAGAAAGATCT-TGAGAGATAACATTCAAGGTATAACCAAGCCAGCTAT 1829236 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | |||| | | ||||| ||||||||| | ||||| || |||||||||| | Sbjct 1829237 CAGAAGATTGGCCAGAAGAGGTGGTGTCAAGCGTATTTCTGGTTTAATCTATGAAGAAGT 1829296 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | ||| || || ||| | | | ||||||| |||||| | || || || Sbjct 1829297 CAGAGGTGTATTAAAATCCTTTTTGGAAAACGTTATCAGAGATGCTGTTACTTACACTGA 1829356 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||| ||||| | ||||||||||| || ||||| |||||||||| |||||| | ||||| Sbjct 1829357 GCATGCTAAGAGAAAGACTGTCACTTCTTTGGATGTCGTCTATGCTTTGAAAAGACAAGG 1829416 >seq11 Length=483692 Score = 129 bits (142), Expect = 9e-26 Identities = 191/268 (71%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||| |||||| | | ||||| | |||||||||| ||||| ||||||||||||||||| Sbjct 291644 GCTAAACGTCATAGAAAGATCT-TGAGAGATAACATTCAAGGTATCACCAAGCCAGCTAT 291702 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | |||| | | ||||| ||||||||| | || |||||| | || ||||| | Sbjct 291703 CAGAAGATTGGCCAGAAGAGGTGGTGTCAAGCGTATTTCCGGATTGATTTACGAAGAAGT 291762 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | |||||||| ||| | | | ||| ||| |||||| | || || || Sbjct 291763 CAGAGGAGTTTTGAAATCCTTTTTGGAAAACGTCATCAGGGATGCTGTTACTTACACTGA 291822 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||| || || | |||||||||||||| ||||| | || || || |||||| | ||||| Sbjct 291823 GCATGCCAAGAGAAAGACTGTCACCTCATTGGATGTTGTTTACGCTTTGAAAAGACAAGG 291882 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | | |||||||| || ||||| Sbjct 291883 AAGAACCTTGTATGGTTTCGGTGGTTAA 291910 >seq7 Length=1100177 Score = 127 bits (140), Expect = 3e-25 Identities = 195/273 (71%), Gaps = 4/273 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||||||||||||| | |||| | | |||||||||| ||||| |||||||| ||||||| Sbjct 462758 CGCTAAGCGTCATAGAAAGAT-TTTAAGAGATAACATTCAAGGTATCACCAAACCAGCTA 462700 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 || | | |||| | | ||||| ||||||||| | || |||||| |||| ||||| Sbjct 462699 TCAGAAGATTGGCCAGAAGAGGTGGTGTCAAGCGTATTTCCGGATTGATCTACGAAGAAG 462640 Query 16551 TTCGTGATGTTTTGAAGATC-TTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACC 16609 | | | || ||||| ||| || | | | ||| ||| || ||| | || || Sbjct 462639 TCAGAGGCGTATTGAA-ATCGTTTTTGGAAAACGTCATCAGAGACGCTGTGACTTACACT 462581 Query 16610 GAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAA 16669 |||||||| || | |||||||||||||| ||||| | || || || |||||| | ||| Sbjct 462580 GAGCACGCCAAGAGAAAGACTGTCACCTCTTTGGATGTTGTGTACGCCTTGAAAAGACAA 462521 Query 16670 GGCCGTAAGATTTATGGTTTTGGAAGTTAATCT 16702 || | | | |||||||| || ||||| || Sbjct 462520 GGAAGAACCTTGTATGGTTTCGGCGGTTAAGCT 462488 >seq4 Length=1632271 Score = 120 bits (132), Expect = 5e-23 Identities = 189/268 (71%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| | | ||||| | ||||||| || ||||| || |||||||||||||| Sbjct 1155793 GCTAAGCGTCACAGAAAGATCT-TGAGAGATAATATTCAAGGTATAACCAAGCCAGCTAT 1155851 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | |||| | | ||||| || |||||| | |||||||| |||| ||||| | Sbjct 1155852 TAGAAGATTGGCCAGAAGAGGTGGTGTTAAGCGTATTTCTGGATTAATCTACGAAGAAGT 1155911 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | |||||||| ||| | ||| ||| ||| |||||| || || || || Sbjct 1155912 CAGAGGCGTTTTGAAATCCTTTTTGGAGAACGTCATCAGAGATGCTGTCACTTACACTGA 1155971 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||||||| | |||||||| || || |||| | ||||| || ||||| | ||||| Sbjct 1155972 GCACGCTAAGAGAAAGACTGTTACTTCATTGGACGTTGTCTACGCTTTGAAGAGACAAGG 1156031 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | | |||||||| || ||||| Sbjct 1156032 TAGAACTTTGTATGGTTTCGGTGGTTAA 1156059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075159770492