Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq5 215 5e-51 seq10 159 4e-34 >seq5 Length=1624186 Score = 215 bits (238), Expect = 5e-51 Identities = 594/900 (66%), Gaps = 47/900 (5%) Strand=Plus/Minus Query 21185 TTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGAT 21244 |||||||| || ||||||||| ||||||||||| ||||||||| |||| || || | Sbjct 610696 TTTTGATAGTCTGAAACTCTTTTCTCGAAAAAATTCGTCTTTCCTGCCAAGGAGATGTTT 610637 Query 21245 TCCATAAAATCAAATGGATT-TTCAGATTTAAATATTTTATTACAACCCAGTTCTGATAA 21303 ||||| |||||||| ||||| |||| || | ||| |||||| ||| | | ||| Sbjct 610636 TCCATGAAATCAAAAGGATTGTTCACGTT-ATATACTTTATTGTTACCTAAGGATACTAA 610578 Query 21304 TAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCAA 21363 || | || || ||||| || | |||||| |||||| |||||| || | ||| Sbjct 610577 CAACCGGTCGGCAACAAACTCCACATATTGGTTCATTAAAGTGGCATTCATTCCTAACAA 610518 Query 21364 TTTTACAGGAAGAGCTTTTGTCAAAAAAGAT-TTTTCTATAGAGACGGCTTCAACAATTA 21422 ||||| |||||| | || ||| | | |||||||||| || ||||| || | Sbjct 610517 GGATACAGAAAGAGCGTCA-TCGAAATATTTCTTTTCTATAGCAACAGCTTCGGTGATGA 610459 Query 21423 TATTTA-----------TTATCCTAGATGTACTAGGGGGATACAATAATTGTTTAAACAT 21471 | ||| |||||| | ||| | | | ||| | || ||| Sbjct 610458 TTTTTTCAACAATCTTTTTATCCAATTTGTTTT----GCA---AATGAGAGT----ACAA 610410 Query 21472 CAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGT 21531 | ||| ||||||||| |||||| ||||| ||||| || || || || |||||||| || Sbjct 610409 TAGACACGCAAAATCAGTATGCAAGCCTTCGTCCCTGCTAATCAACTCGTTAGAAAACGT 610350 Query 21532 TAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAA 21591 ||||| ||||| | ||||| ||||| |||||||| ||||| ||||| | |||||| || Sbjct 610349 CAAACCTGGCATGAGACCTCTTTTTTTCAACCAAAAGATTGAAGCAAACGATCCTGAGAA 610290 Query 21592 GAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATC 21651 || || || || ||||||||||| ||||| | ||||| | | || | | || Sbjct 610289 AAATATTCCTTCTACGGCAGCAAAGGCAACAAGACGTTCTGCAAACAAAGCGTTGTCGTC 610230 Query 21652 CAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGC 21711 ||||| | ||||| | || || ||||| || | || || || || || Sbjct 610229 GTTGATCCAACGTAAAGCCCAGTCAGCTTTCTCTTTGATGCTCGGTATAGTTTCGATGGC 610170 Query 21712 TTTTAA-AAGA----TG-AtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNN 21765 || || |||| || | ||| | ||| | | ||| Sbjct 610169 ATTGAACAAGAATTCTGCCTCTTTCTGATC----TTTGATATAAGTATCTATAAGTAAGG 610114 Query 21766 ACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGC 21825 | ||| | || |||||||| ||||| ||| ||| |||||||| || || ||| |||| Sbjct 610113 A--ATAGGTCTCGGAATGTATGTTTTCCATCATTATTTGAAATCCATAGAAGCATTTTGC 610056 Query 21826 CTCTGAACA-TTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCAT 21884 ||| | || ||| ||||| | | |||| ||| | | |||||||| || || || | Sbjct 610055 CTC-GCTCACTTGCACCTCTGTAGAAAAGTTTTGCACTAGATTTTCATTGACAATGCCGT 609997 Query 21885 CACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATT 21944 ||||||| |||||||| || || | | ||| ||||| || || ||| ||||| Sbjct 609996 CACTGGCAGCAAAAAACGCTAAAACTCTGGATATGAAATACCGCTCACCATC-GTTAAGC 609938 Query 21945 TT----TTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCA-AAAGCT 21999 || |||||||| ||| ||||||| |||||| | ||||| | ||||| |||| | Sbjct 609937 TTGTAATTCCAATCATATATATCTTTTCCTAAATCAATCTCTTCGGCAGTCCAGAAAGAT 609878 Query 22000 AGCAATAGCCTTTTTATACATAATCCAGATATCATTATATATTATTGGAAATATTACAAA 22059 || |||||||||||||| ||| || |||| || | || ||||| | ||||| Sbjct 609877 -GCCTCTGCCTTTTTATACATCTGCCAAATCTCATGGTACTTGATAGGAAAAAGCACAAA 609819 >seq10 Length=744508 Score = 159 bits (176), Expect = 4e-34 Identities = 311/455 (68%), Gaps = 16/455 (4%) Strand=Plus/Plus Query 21185 TTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGAT 21244 |||||||||||| ||||||||||||||||| || || ||||| |||| || || | Sbjct 45629 TTTTGATAATCAGAGACTCTTTTTTCGAAAAAGTTGGTTTTTCCGGCCAAGGAAATGTTT 45688 Query 21245 TCCATAAAATCAAATGGATTTTCA--GATTTAAATATT-TTATTACAACCCAGTTCTGAT 21301 |||||||||||||||||||| | | | |||| || || |||| ||| | Sbjct 45689 TCCATAAAATCAAATGGATTGGTAACGTTGTAAACCTTGTTGTTAC---CCAAGGCGACC 45745 Query 21302 AATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATC 21361 || ||||| || || ||||| | ||||||||||| |||| || ||||| || | | Sbjct 45746 AACAATCTGTCGGCGCAGAATTCCACGTATTGACACATCAATTTGCAGTTCATGCCCAAC 45805 Query 21362 AATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATT 21421 || || || | || | || || | |||||| || ||| ||||| || Sbjct 45806 AAGGAAACTGGCAAGGCGTCGGTAAAGTAGTCTTTTTCAATGTTGACAGCTTCGGTGATG 45865 Query 21422 ATATTT-----ATTATCCTAGATGTACTAGGGGGATACAATAATTGTTTAAACATCAAAC 21476 || || | | ||| | || | | | | || || ||||| ||| | Sbjct 45866 ATTTTCTCGACAATTTCCGGGT----CTGGTTTGTT-CTGCAAGTGAGAAAACAACAAGC 45920 Query 21477 ATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAAC 21536 | ||||| || ||||||||||| || || | || ||||| |||||||| || || | Sbjct 45921 AAGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAATTCGTTAGAAAACGTCAAGC 45980 Query 21537 CGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAA 21596 | ||||| || ||||| ||||| ||||| || || || ||||| | || || ||||||| Sbjct 45981 CCGGCATCAAACCTCTTTTTTTCAACCAGAAAATAGAAGCAAAAGAGCCCGAGAAGAAAA 46040 Query 21597 TGCCCTCAACGGCAGCAAATGCAACTAATCGTTCA 21631 |||| ||||| |||||||| ||||| |||| |||| Sbjct 46041 TGCCTTCAACAGCAGCAAAGGCAACCAATCTTTCA 46075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531900507454560