Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03-
01] 44 sequences; 16,719,687 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq5 215 5e-51
seq10 159 4e-34
>seq5
Length=1624186
Score = 215 bits (238), Expect = 5e-51
Identities = 594/900 (66%), Gaps = 47/900 (5%)
Strand=Plus/Minus
Query 21185 TTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGAT 21244
|||||||| || ||||||||| ||||||||||| ||||||||| |||| || || |
Sbjct 610696 TTTTGATAGTCTGAAACTCTTTTCTCGAAAAAATTCGTCTTTCCTGCCAAGGAGATGTTT 610637
Query 21245 TCCATAAAATCAAATGGATT-TTCAGATTTAAATATTTTATTACAACCCAGTTCTGATAA 21303
||||| |||||||| ||||| |||| || | ||| |||||| ||| | | |||
Sbjct 610636 TCCATGAAATCAAAAGGATTGTTCACGTT-ATATACTTTATTGTTACCTAAGGATACTAA 610578
Query 21304 TAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCAA 21363
|| | || || ||||| || | |||||| |||||| |||||| || | |||
Sbjct 610577 CAACCGGTCGGCAACAAACTCCACATATTGGTTCATTAAAGTGGCATTCATTCCTAACAA 610518
Query 21364 TTTTACAGGAAGAGCTTTTGTCAAAAAAGAT-TTTTCTATAGAGACGGCTTCAACAATTA 21422
||||| |||||| | || ||| | | |||||||||| || ||||| || |
Sbjct 610517 GGATACAGAAAGAGCGTCA-TCGAAATATTTCTTTTCTATAGCAACAGCTTCGGTGATGA 610459
Query 21423 TATTTA-----------TTATCCTAGATGTACTAGGGGGATACAATAATTGTTTAAACAT 21471
| ||| |||||| | ||| | | | ||| | || |||
Sbjct 610458 TTTTTTCAACAATCTTTTTATCCAATTTGTTTT----GCA---AATGAGAGT----ACAA 610410
Query 21472 CAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGT 21531
| ||| ||||||||| |||||| ||||| ||||| || || || || |||||||| ||
Sbjct 610409 TAGACACGCAAAATCAGTATGCAAGCCTTCGTCCCTGCTAATCAACTCGTTAGAAAACGT 610350
Query 21532 TAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAA 21591
||||| ||||| | ||||| ||||| |||||||| ||||| ||||| | |||||| ||
Sbjct 610349 CAAACCTGGCATGAGACCTCTTTTTTTCAACCAAAAGATTGAAGCAAACGATCCTGAGAA 610290
Query 21592 GAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATC 21651
|| || || || ||||||||||| ||||| | ||||| | | || | | ||
Sbjct 610289 AAATATTCCTTCTACGGCAGCAAAGGCAACAAGACGTTCTGCAAACAAAGCGTTGTCGTC 610230
Query 21652 CAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGC 21711
||||| | ||||| | || || ||||| || | || || || || ||
Sbjct 610229 GTTGATCCAACGTAAAGCCCAGTCAGCTTTCTCTTTGATGCTCGGTATAGTTTCGATGGC 610170
Query 21712 TTTTAA-AAGA----TG-AtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNN 21765
|| || |||| || | ||| | ||| | | |||
Sbjct 610169 ATTGAACAAGAATTCTGCCTCTTTCTGATC----TTTGATATAAGTATCTATAAGTAAGG 610114
Query 21766 ACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGC 21825
| ||| | || |||||||| ||||| ||| ||| |||||||| || || ||| ||||
Sbjct 610113 A--ATAGGTCTCGGAATGTATGTTTTCCATCATTATTTGAAATCCATAGAAGCATTTTGC 610056
Query 21826 CTCTGAACA-TTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCAT 21884
||| | || ||| ||||| | | |||| ||| | | |||||||| || || || |
Sbjct 610055 CTC-GCTCACTTGCACCTCTGTAGAAAAGTTTTGCACTAGATTTTCATTGACAATGCCGT 609997
Query 21885 CACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATT 21944
||||||| |||||||| || || | | ||| ||||| || || ||| |||||
Sbjct 609996 CACTGGCAGCAAAAAACGCTAAAACTCTGGATATGAAATACCGCTCACCATC-GTTAAGC 609938
Query 21945 TT----TTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCA-AAAGCT 21999
|| |||||||| ||| ||||||| |||||| | ||||| | ||||| |||| |
Sbjct 609937 TTGTAATTCCAATCATATATATCTTTTCCTAAATCAATCTCTTCGGCAGTCCAGAAAGAT 609878
Query 22000 AGCAATAGCCTTTTTATACATAATCCAGATATCATTATATATTATTGGAAATATTACAAA 22059
|| |||||||||||||| ||| || |||| || | || ||||| | |||||
Sbjct 609877 -GCCTCTGCCTTTTTATACATCTGCCAAATCTCATGGTACTTGATAGGAAAAAGCACAAA 609819
>seq10
Length=744508
Score = 159 bits (176), Expect = 4e-34
Identities = 311/455 (68%), Gaps = 16/455 (4%)
Strand=Plus/Plus
Query 21185 TTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGAT 21244
|||||||||||| ||||||||||||||||| || || ||||| |||| || || |
Sbjct 45629 TTTTGATAATCAGAGACTCTTTTTTCGAAAAAGTTGGTTTTTCCGGCCAAGGAAATGTTT 45688
Query 21245 TCCATAAAATCAAATGGATTTTCA--GATTTAAATATT-TTATTACAACCCAGTTCTGAT 21301
|||||||||||||||||||| | | | |||| || || |||| ||| |
Sbjct 45689 TCCATAAAATCAAATGGATTGGTAACGTTGTAAACCTTGTTGTTAC---CCAAGGCGACC 45745
Query 21302 AATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATC 21361
|| ||||| || || ||||| | ||||||||||| |||| || ||||| || | |
Sbjct 45746 AACAATCTGTCGGCGCAGAATTCCACGTATTGACACATCAATTTGCAGTTCATGCCCAAC 45805
Query 21362 AATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATT 21421
|| || || | || | || || | |||||| || ||| ||||| ||
Sbjct 45806 AAGGAAACTGGCAAGGCGTCGGTAAAGTAGTCTTTTTCAATGTTGACAGCTTCGGTGATG 45865
Query 21422 ATATTT-----ATTATCCTAGATGTACTAGGGGGATACAATAATTGTTTAAACATCAAAC 21476
|| || | | ||| | || | | | | || || ||||| ||| |
Sbjct 45866 ATTTTCTCGACAATTTCCGGGT----CTGGTTTGTT-CTGCAAGTGAGAAAACAACAAGC 45920
Query 21477 ATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAAC 21536
| ||||| || ||||||||||| || || | || ||||| |||||||| || || |
Sbjct 45921 AAGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAATTCGTTAGAAAACGTCAAGC 45980
Query 21537 CGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAA 21596
| ||||| || ||||| ||||| ||||| || || || ||||| | || || |||||||
Sbjct 45981 CCGGCATCAAACCTCTTTTTTTCAACCAGAAAATAGAAGCAAAAGAGCCCGAGAAGAAAA 46040
Query 21597 TGCCCTCAACGGCAGCAAATGCAACTAATCGTTCA 21631
|||| ||||| |||||||| ||||| |||| ||||
Sbjct 46041 TGCCTTCAACAGCAGCAAAGGCAACCAATCTTTCA 46075
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531900507454560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |