Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03-
01] 44 sequences; 16,719,687 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq5 118 3e-21
seq10 96.9 9e-15
>seq5
Length=1624186
Score = 118 bits (130), Expect = 3e-21
Identities = 139/186 (75%), Gaps = 3/186 (2%)
Strand=Plus/Plus
Query 22462 TGGATGAACAATGA--ACG-TTCATTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAA 22518
||||| ||| | || ||| || || || ||||||||| |||| ||||||| || |||
Sbjct 610221 TGGATCAACGACGACAACGCTTTGTTTGCAGAACGTCTTGTTGCCTTTGCTGCCGTAGAA 610280
Query 22519 GGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATG 22578
|| || || || || ||| | ||| | ||||||||||| | |||||| | | | |||
Sbjct 610281 GGAATATTTTTCTCAGGATCGTTTGCTTCAATCTTTTGGTTGAAAAAAAGAGGTCTCATG 610340
Query 22579 CCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTT 22638
|| ||| | |||||||| || ||||| |||||| | || || || | ||||| ||||||
Sbjct 610341 CCAGGTTTGACGTTTTCTAACGAGTTGATTAGCAGGGACGAAGGCTTGCATACTGATTTT 610400
Query 22639 GCGTGT 22644
||||||
Sbjct 610401 GCGTGT 610406
>seq10
Length=744508
Score = 96.9 bits (106), Expect = 9e-15
Identities = 158/227 (70%), Gaps = 3/227 (1%)
Strand=Plus/Minus
Query 22420 ACCATTCAATCAATTAAGAATAAGGCAGATTGGGCGCTGAAATGGATGAACAATGAACGT 22479
|| |||| | ||| ||| | ||||| || ||||| ||| |||||| ||| | || |
Sbjct 46146 ACAATTCCACAAATCAAGCAAAAGGCCGACTGGGCCTTGAGATGGATCAACGACGACCAG 46087
Query 22480 TCATTC---GCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGA 22536
| || || ||| | | |||| ||||||| ||||||||||||||||| || ||
Sbjct 46086 GCCTTGTTTGCTGAAAGATTGGTTGCCTTTGCTGCTGTTGAAGGCATTTTCTTCTCGGGC 46027
Query 22537 GCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCA 22596
| ||| | | || || ||| | |||||| | | | |||||||| | ||||||||
Sbjct 46026 TCTTTTGCTTCTATTTTCTGGTTGAAAAAAAGAGGTTTGATGCCGGGCTTGACGTTTTCT 45967
Query 22597 AATGAGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTG 22643
|| || || || || |||| || ||| | || ||||| ||||| ||
Sbjct 45966 AACGAATTGATCTGCAGAGACGAAGGTTTGCACACCGACTTTGCTTG 45920
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303352865234408
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |