Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq4 116 3e-21 seq1 91.5 1e-13 >seq4 Length=1632271 Score = 116 bits (128), Expect = 3e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780 || || |||| |||| ||||| |||||||| ||||||||||||| || |||| || || Sbjct 76493 CTGAGGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCG 76552 Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840 || ||||| || || || ||| | || | | |||||||| || | || |||||| Sbjct 76553 TCTTCCAACTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCTTTG 76612 Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || ||| | || || | | | | ||||| || |||| ||||| ||| ||| Sbjct 76613 TCTTGAATCTTGGATTTGACATTGTCAATGGTGTCCGAGGACTCCACTTCCAAGGTAATG 76672 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 ||||| ||||| || |||||||| ||||| ||||| ||| Sbjct 76673 GTTTTACCGGTAAGGGTTTTGACGAAAATTTGCATCTTG 76711 >seq1 Length=3127730 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/220 (69%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780 || || |||| |||| |||||||||||||| ||||||||||| | || |||| | | Sbjct 1884751 CTAAGGACCAAGTGCAAAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTACCA 1884692 Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840 || || |||||||| || ||| |||| | | ||||| || || | || || ||| Sbjct 1884691 TCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCCTTG 1884632 Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || ||| | ||| || | | | | |||||| || || ||||| |||||| Sbjct 1884631 TCTTGAATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCAACTTCCAAAGTGATG 1884572 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTGT 16940 || || || |||| || || ||||| || |||||| ||| Sbjct 1884571 GTCTTACCAGTCAAGGTCTTAACAAAGATTTGCATTATGT 1884532 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780 || || |||| |||| |||||||||||||| ||||||||||| | || |||| | | Sbjct 1884979 CTAAGGACCAAGTGCAAAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTACCA 1884920 Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840 || || |||||||| || ||| |||| | | ||||| || || | || || ||| Sbjct 1884919 TCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCCTTG 1884860 Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || ||| | ||| || | | | | |||||| || || ||||| |||||| Sbjct 1884859 TCTTGAATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCAACTTCCAAAGTGATG 1884800 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || || |||| || || || || || ||||| Sbjct 1884799 GTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 1884765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405087782771560