Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03-
01] 44 sequences; 16,719,687 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq5 266 4e-66
seq10 165 9e-36
>seq5
Length=1624186
Score = 266 bits (294), Expect = 4e-66
Identities = 440/629 (70%), Gaps = 7/629 (1%)
Strand=Plus/Minus
Query 93082 GTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATA-TCAACTCATTGC 93140
||||| || |||||||| || ||||| || |||||||| | || || ||||||| ||
Sbjct 610415 GTACAATAGACACGCAAAATCAGTATGCAAGCCTTCGTCCC-TGCTAATCAACTCGTTAG 610357
Query 93141 TGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTAC 93200
|| || |||||||| | || |||| ||| || | |||||| ||||||||||| |
Sbjct 610356 AAAACGTCAAACCTGGCATGAGACCTCTTTTTTTCAACCAAAAGATTGAAGCAAACGATC 610297
Query 93201 CAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGG 93260
| || |||||||| ||||| ||||| ||||| || |||| |||||| ||||| |||
Sbjct 610296 CTGAGAAAAATATTCCTTCTACGGCAGCAAAGGCAACAAGACGTTCTGCAAACAAAGCGT 610237
Query 93261 AATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTT 93320
| | ||||||| ||||||||| || ||||| | || || | |||| ||||
Sbjct 610236 TGTCGTCGTTGATCCAACGTAAAGCCCAGTCAGCTTTCTCTTTGATGCTCGGTATAGTTT 610177
Query 93321 CGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACA 93380
|||| || || || | | | ||| ||| | | |||| || || ||||| || | |
Sbjct 610176 CGATGGCATTGAACAAGAATTCTGCCTCTTTCTGATCTTTGATATAAGTATCTATAAGTA 610117
Query 93381 GAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAG 93440
||||| | || ||||| | || ||||| ||||| ||||| ||||| ||| | |
Sbjct 610116 AGGAATAGGTCTCGGAATGTATGTTTTCCATCATTATTTGAAATCCATAGAAGCATTTTG 610057
Query 93441 CTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCAT 93500
| || | | ||||| ||| |||||| | | || |||||||||||||| || || |
Sbjct 610056 CCTCGCTCACTTGCACCTCTGTAGAAAAGTTTTGCACTAGATTTTCATTGACAATGCCGT 609997
Query 93501 CGGATGCTGCaaaaaaaGCCAATA-TATGCTTTATAAAATGTTTCTCATCATCTTTAAGC 93559
| || |||||||| || || | | || ||| |||| |||| |||| ||||||
Sbjct 609996 CACTGGCAGCAAAAAACGCTAAAACTCTG-GATATGAAATACCGCTCACCATCGTTAAGC 609938
Query 93560 TT---ATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGAT 93616
|| || |||||| ||| ||||||| | ||| | |||||| ||||||| || |||
Sbjct 609937 TTGTAATTCCAATCATATATATCTTTTCCTAAATCAATCTCTTCGGCAGTCCAGAAAGAT 609878
Query 93617 GCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAA 93676
|| ||||| ||||| ||||| | ||| || || || || | || ||||| | |||||
Sbjct 609877 GCCTCTGCCTTTTTATACATCTGCCAAATCTCATGGTACTTGATAGGAAAAAGCACAAAT 609818
Query 93677 CGATTAGGGTTATCTTTTAGTAACGGCTC 93705
|| || | || || || || | |||||
Sbjct 609817 CGCTTGGTATTCTCCTTAAGAAGTGGCTC 609789
>seq10
Length=744508
Score = 165 bits (182), Expect = 9e-36
Identities = 571/884 (65%), Gaps = 24/884 (3%)
Strand=Plus/Plus
Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849
||||||||| ||||| || || ||| ||||||| || || || || ||||| |
Sbjct 45616 CATAACACCTGCCTTTTGATAATCAGAGACTCTTTTTTCGAAAAAGTTGGTTTTTCCGGC 45675
Query 92850 CAAAGATATCGAATTCACTAGTG---ATTGGATTCTTGGCGTTATAATACTTTTC---AC 92903
||| || || | ||| || | |||||| | |||| ||| ||| | ||
Sbjct 45676 CAAGGAAAT-GTTTTCCATAAAATCAAATGGATTGGTAACGTTGTAAACCTTGTTGTTAC 45734
Query 92904 CGATCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCAC 92963
| ||| || ||| ||||| || || ||||| | ||| ||| ||||||| | |
Sbjct 45735 C---CAAGGCGACCAACAATCTGTCGGCGCAGAATTCCACGTATTGACACATCAATTTGC 45791
Query 92964 AATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAA 93023
| ||||| || | | || || | |||||||| ||| | ||||| || || |
Sbjct 45792 AGTTCATGCCCAACAAGGAAACTGGCAAGGCGTCGGTAAAGTAGTCTTTTTCAATGTTGA 45851
Query 93024 CGGCTTCTTTCAAGATTTCTATTACTCTACTATTTGGTGGTTT---TTGTACGACA--TA 93078
| ||||| | | ||||| ||| || |||| ||| | |||| | || |
Sbjct 45852 CAGCTTCGGTGATGATTTT-----CTCGACAATTTCCGGGTCTGGTTTGTTCTGCAAGTG 45906
Query 93079 ATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATT 93138
| ||| ||||| ||||||||||| || ||||||||||||| | ||||| || ||
Sbjct 45907 AGAAAACAACAAGCAAGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAATTCGTT 45966
Query 93139 GCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACT 93198
|| || || || || | || |||| ||| || | ||| || || |||||||||
Sbjct 45967 AGAAAACGTCAAGCCCGGCATCAAACCTCTTTTTTTCAACCAGAAAATAGAAGCAAAAGA 46026
Query 93199 ACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGC 93258
|| || || || || ||||| || || ||||| || || | | ||| ||||| ||
Sbjct 46027 GCCCGAGAAGAAAATGCCTTCAACAGCAGCAAAGGCAACCAATCTTTCAGCAAACAAGGC 46086
Query 93259 GGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGT 93318
| | |||||||| | || ||||| ||||| |||| ||| || || | |||
Sbjct 46087 CTGGTCGTCGTTGATCCATCTCAAGGCCCAGTCGGCCTTTTGCTTGATTTGTGGAATTGT 46146
Query 93319 TTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAA 93378
|| || || || || | | || ||| | | || | || || || || ||
Sbjct 46147 CTCAATGGCATTGAACAAAAACTCAGACTCCTTAGGGTCCTTGACATACGTGTCAATCAA 46206
Query 93379 CAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCT 93438
|| || || |||| ||||||| ||||||||| || ||||| ||||||||| | |
Sbjct 46207 TAGCGAGTATGTTTCCGAATGGATATTCTCCATCATGATCTGGAACCCGTAGAAAAACTT 46266
Query 93439 AGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACC 93498
|| || | || ||| ||||| |||||| |||| || | || || ||||| || ||
Sbjct 46267 GGCCTCTGGGACCTGAACTTCGGCAGAAAAGTTCTCCACCAAGTTCTCGTTGACAATTCC 46326
Query 93499 ATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA- 93557
|| || || |||||||| ||||| | | || ||| ||| | || | |
Sbjct 46327 GTCCGACGCAGCAAAAAACGCCAAAACCCGAGAAATGAAAAACCGCTCGTTTTCCGTCAA 46386
Query 93558 --GCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGA 93615
| || | ||| ||| | ||| || || | ||| | || ||| | ||||| |||||
Sbjct 46387 CCGGTTGTTCCAGTCGTGCAAATCCTTGGACAAATCAATCTCCTCGGCTGTCCAGAACGA 46446
Query 93616 TGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATA-TTGA 93658
||||| || || |||||||| | ||| || || || || ||||
Sbjct 46447 CGCTTCGGCCTTCTTGTACATCTGCCAAATCTCATGGTACTTGA 46490
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556860493726560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |