Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq5 266 4e-66 seq10 165 9e-36 >seq5 Length=1624186 Score = 266 bits (294), Expect = 4e-66 Identities = 440/629 (70%), Gaps = 7/629 (1%) Strand=Plus/Minus Query 93082 GTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATA-TCAACTCATTGC 93140 ||||| || |||||||| || ||||| || |||||||| | || || ||||||| || Sbjct 610415 GTACAATAGACACGCAAAATCAGTATGCAAGCCTTCGTCCC-TGCTAATCAACTCGTTAG 610357 Query 93141 TGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTAC 93200 || || |||||||| | || |||| ||| || | |||||| ||||||||||| | Sbjct 610356 AAAACGTCAAACCTGGCATGAGACCTCTTTTTTTCAACCAAAAGATTGAAGCAAACGATC 610297 Query 93201 CAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGG 93260 | || |||||||| ||||| ||||| ||||| || |||| |||||| ||||| ||| Sbjct 610296 CTGAGAAAAATATTCCTTCTACGGCAGCAAAGGCAACAAGACGTTCTGCAAACAAAGCGT 610237 Query 93261 AATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTT 93320 | | ||||||| ||||||||| || ||||| | || || | |||| |||| Sbjct 610236 TGTCGTCGTTGATCCAACGTAAAGCCCAGTCAGCTTTCTCTTTGATGCTCGGTATAGTTT 610177 Query 93321 CGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACA 93380 |||| || || || | | | ||| ||| | | |||| || || ||||| || | | Sbjct 610176 CGATGGCATTGAACAAGAATTCTGCCTCTTTCTGATCTTTGATATAAGTATCTATAAGTA 610117 Query 93381 GAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAG 93440 ||||| | || ||||| | || ||||| ||||| ||||| ||||| ||| | | Sbjct 610116 AGGAATAGGTCTCGGAATGTATGTTTTCCATCATTATTTGAAATCCATAGAAGCATTTTG 610057 Query 93441 CTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCAT 93500 | || | | ||||| ||| |||||| | | || |||||||||||||| || || | Sbjct 610056 CCTCGCTCACTTGCACCTCTGTAGAAAAGTTTTGCACTAGATTTTCATTGACAATGCCGT 609997 Query 93501 CGGATGCTGCaaaaaaaGCCAATA-TATGCTTTATAAAATGTTTCTCATCATCTTTAAGC 93559 | || |||||||| || || | | || ||| |||| |||| |||| |||||| Sbjct 609996 CACTGGCAGCAAAAAACGCTAAAACTCTG-GATATGAAATACCGCTCACCATCGTTAAGC 609938 Query 93560 TT---ATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGAT 93616 || || |||||| ||| ||||||| | ||| | |||||| ||||||| || ||| Sbjct 609937 TTGTAATTCCAATCATATATATCTTTTCCTAAATCAATCTCTTCGGCAGTCCAGAAAGAT 609878 Query 93617 GCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAA 93676 || ||||| ||||| ||||| | ||| || || || || | || ||||| | ||||| Sbjct 609877 GCCTCTGCCTTTTTATACATCTGCCAAATCTCATGGTACTTGATAGGAAAAAGCACAAAT 609818 Query 93677 CGATTAGGGTTATCTTTTAGTAACGGCTC 93705 || || | || || || || | ||||| Sbjct 609817 CGCTTGGTATTCTCCTTAAGAAGTGGCTC 609789 >seq10 Length=744508 Score = 165 bits (182), Expect = 9e-36 Identities = 571/884 (65%), Gaps = 24/884 (3%) Strand=Plus/Plus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 ||||||||| ||||| || || ||| ||||||| || || || || ||||| | Sbjct 45616 CATAACACCTGCCTTTTGATAATCAGAGACTCTTTTTTCGAAAAAGTTGGTTTTTCCGGC 45675 Query 92850 CAAAGATATCGAATTCACTAGTG---ATTGGATTCTTGGCGTTATAATACTTTTC---AC 92903 ||| || || | ||| || | |||||| | |||| ||| ||| | || Sbjct 45676 CAAGGAAAT-GTTTTCCATAAAATCAAATGGATTGGTAACGTTGTAAACCTTGTTGTTAC 45734 Query 92904 CGATCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCAC 92963 | ||| || ||| ||||| || || ||||| | ||| ||| ||||||| | | Sbjct 45735 C---CAAGGCGACCAACAATCTGTCGGCGCAGAATTCCACGTATTGACACATCAATTTGC 45791 Query 92964 AATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAA 93023 | ||||| || | | || || | |||||||| ||| | ||||| || || | Sbjct 45792 AGTTCATGCCCAACAAGGAAACTGGCAAGGCGTCGGTAAAGTAGTCTTTTTCAATGTTGA 45851 Query 93024 CGGCTTCTTTCAAGATTTCTATTACTCTACTATTTGGTGGTTT---TTGTACGACA--TA 93078 | ||||| | | ||||| ||| || |||| ||| | |||| | || | Sbjct 45852 CAGCTTCGGTGATGATTTT-----CTCGACAATTTCCGGGTCTGGTTTGTTCTGCAAGTG 45906 Query 93079 ATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATT 93138 | ||| ||||| ||||||||||| || ||||||||||||| | ||||| || || Sbjct 45907 AGAAAACAACAAGCAAGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAATTCGTT 45966 Query 93139 GCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACT 93198 || || || || || | || |||| ||| || | ||| || || ||||||||| Sbjct 45967 AGAAAACGTCAAGCCCGGCATCAAACCTCTTTTTTTCAACCAGAAAATAGAAGCAAAAGA 46026 Query 93199 ACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGC 93258 || || || || || ||||| || || ||||| || || | | ||| ||||| || Sbjct 46027 GCCCGAGAAGAAAATGCCTTCAACAGCAGCAAAGGCAACCAATCTTTCAGCAAACAAGGC 46086 Query 93259 GGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGT 93318 | | |||||||| | || ||||| ||||| |||| ||| || || | ||| Sbjct 46087 CTGGTCGTCGTTGATCCATCTCAAGGCCCAGTCGGCCTTTTGCTTGATTTGTGGAATTGT 46146 Query 93319 TTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAA 93378 || || || || || | | || ||| | | || | || || || || || Sbjct 46147 CTCAATGGCATTGAACAAAAACTCAGACTCCTTAGGGTCCTTGACATACGTGTCAATCAA 46206 Query 93379 CAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCT 93438 || || || |||| ||||||| ||||||||| || ||||| ||||||||| | | Sbjct 46207 TAGCGAGTATGTTTCCGAATGGATATTCTCCATCATGATCTGGAACCCGTAGAAAAACTT 46266 Query 93439 AGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACC 93498 || || | || ||| ||||| |||||| |||| || | || || ||||| || || Sbjct 46267 GGCCTCTGGGACCTGAACTTCGGCAGAAAAGTTCTCCACCAAGTTCTCGTTGACAATTCC 46326 Query 93499 ATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA- 93557 || || || |||||||| ||||| | | || ||| ||| | || | | Sbjct 46327 GTCCGACGCAGCAAAAAACGCCAAAACCCGAGAAATGAAAAACCGCTCGTTTTCCGTCAA 46386 Query 93558 --GCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGA 93615 | || | ||| ||| | ||| || || | ||| | || ||| | ||||| ||||| Sbjct 46387 CCGGTTGTTCCAGTCGTGCAAATCCTTGGACAAATCAATCTCCTCGGCTGTCCAGAACGA 46446 Query 93616 TGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATA-TTGA 93658 ||||| || || |||||||| | ||| || || || || |||| Sbjct 46447 CGCTTCGGCCTTCTTGTACATCTGCCAAATCTCATGGTACTTGA 46490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860493726560