Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq4 95.1 1e-14 seq1 87.8 2e-12 >seq4 Length=1632271 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 111184 AAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCC 111243 || ||||||||||| |||||||| | ||||| |||||||||||| ||||| ||| || Sbjct 76710 AAGATGCAAATTTTCGTCAAAACCCTTACCGGTAAAACCATTACCTTGGAAGTGGAGTCC 76651 Query 111244 AGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGAT 111303 || | ||| | | || ||| || ||| ||||||||||| |||| || Sbjct 76650 TCGGACACCATTGACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATTCCACCAGAC 76591 Query 111304 CAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 111363 |||||||| | || | ||| || || || |||||||| | ||| || |||| || Sbjct 76590 CAACAAAGATTGATCTTTGCTGGTAAGCAGTTGGAAGACGGCAGAACCTTGTCCGACTAC 76531 Query 111364 AATATACAAAAAGAATCTAC 111383 || || ||||| ||||| || Sbjct 76530 AACATCCAAAAGGAATCCAC 76511 >seq1 Length=3127730 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245 ||||||||| ||||| || || |||| || || ||||| || ||||| ||| || Sbjct 1884536 AATGCAAATCTTTGTTAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCCTC 1884595 Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 || || ||| | | || || ||| ||| ||||| ||||| |||| ||||| Sbjct 1884596 TGACACTATTGACAACGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCAGATCA 1884655 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365 |||||| | |||| ||| || |||||||| |||||| || ||| || | || || || Sbjct 1884656 ACAAAGATTGATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACCTTGTCTGACTACAA 1884715 Query 111366 TATACAAAAAGAATCTAC 111383 || ||||| || || || Sbjct 1884716 CATTCAAAAGGAGTCCAC 1884733 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||||| || || || || |||| || || ||||| || ||||| ||| || Sbjct 1884993 ATGCAAATCTTCGTTAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCCTCT 1885052 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || || ||| | | || || ||| ||| ||||| ||||| |||| |||||| Sbjct 1885053 GACACTATTGACAACGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCAGATCAA 1885112 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||||| | |||| ||| || |||||||| |||||| || ||| || | || || || Sbjct 1885113 CAAAGATTGATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACCTTGTCTGACTACAAC 1885172 Query 111367 ATACAAAAAGAATCTAC 111383 || ||||| ||||| || Sbjct 1885173 ATTCAAAAGGAATCCAC 1885189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423039773144800