Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq6 149 5e-31 seq4 147 2e-30 seq1 147 2e-30 seq10 89.7 4e-13 >seq6 Length=1504906 Score = 149 bits (164), Expect = 5e-31 Identities = 165/220 (75%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 ||| ||||||||||| || ||||| || | || | ||||| ||| | |||| ||| | Sbjct 99479 TTTCGTTAAAACTTTGACTGGTAAGACTATTACCTTGGAAGTTGAATCTTCCGACACCAT 99538 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| || ||||| || ||||||||||| || ||||| ||||| ||||||||| | | Sbjct 99539 TGACAATGTCAAATCTAAGATTCAAGACAAAGAAGGTATCCCACCTGATCAACAAAGATT 99598 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || ||||| || || || ||||| ||| | | ||| | || || ||||| |||||||| Sbjct 99599 GATCTTTGCTGGTAAGCAATTAGAAGATGGCAGAACCTTGTCTGACTACAATATTCAAAA 99658 Query 22407 AGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||||||| | || || |||||| ||||| | || ||| Sbjct 99659 GGAATCCACCTTGCACTTGGTTTTGAGATTGAGAGGTGGT 99698 >seq4 Length=1632271 Score = 147 bits (162), Expect = 2e-30 Identities = 173/234 (74%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272 || |||||||||||||| || ||||| | ||||||||||| | || | |||||||| Sbjct 76713 GTCAAGATGCAAATTTTCGTCAAAACCCTTACCGGTAAAACCATTACCTTGGAAGTGGAG 76654 Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332 || | || ||| | ||| || ||||| || ||||||||||| || ||||||||||| Sbjct 76653 TCCTCGGACACCATTGACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATTCCACCA 76594 Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392 || |||||| | | || ||||| || || ||||| || || | | ||| | ||||| Sbjct 76593 GACCAACAAAGATTGATCTTTGCTGGTAAGCAGTTGGAAGACGGCAGAACCTTGTCCGAC 76534 Query 22393 TACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||| ||||| |||||||| | || || || | ||||| | || ||| Sbjct 76533 TACAACATCCAAAAGGAATCCACTTTGCACTTGGTCCTCAGATTGAGAGGTGGT 76480 Score = 86.0 bits (94), Expect = 5e-12 Identities = 138/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 129117 CAAGTATTTGTTTATTACTTGAAAGTCACCCGCCAAAACGCGCC--GAACGTAAATGTTG 129174 ||||||| ||| | || |||||| ||||| |||||||| | | ||| |||||||| Sbjct 1009901 CAAGTATGGGTTCACTATTTGAAACTCACCGGCCAAAACTCTTCTGGAA--TAAATGTTA 1009844 Query 129175 TTGGTGAACGGCTCAAACGATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGC 129234 |||| | || || || |||| |||| || || ||||||| || | || || ||| Sbjct 1009843 GAGGTGTATGGTTCGAAACATTCGTTGTAACCCAAGATTTGAGAGGTGGAAGCAGTTGGC 1009784 Query 129235 ATGTAAGCCACGCAAAGCGAGTTTCGCAAACCGTGCTGTTTAATGTCtttttttAATTGT 129294 || ||| || | | ||||||| ||||||||||| |||| | ||| ||||| | Sbjct 1009783 ATAGGAGCAACCAACAAAGAGTTTCTCAAACCGTGCTTCTTAACTT-TTTGTTTAAGAGA 1009725 Query 129295 GTCC-AGTCCCACA 129307 ||| ||||||||| Sbjct 1009724 ATCCCAGTCCCACA 1009711 >seq1 Length=3127730 Score = 147 bits (162), Expect = 2e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || ||||| || || || ||||| || ||||| | ||||| ||| || | Sbjct 1884993 ATGCAAATCTTCGTTAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCCTCT 1885052 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| ||| |||||||||||||| ||||||||||| |||||| Sbjct 1885053 GACACTATTGACAACGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCAGATCAA 1885112 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || ||||| || ||||| ||||| ||| | ||| | || || |||||| Sbjct 1885113 CAAAGATTGATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACCTTGTCTGACTACAAC 1885172 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTT 22447 |||||||| |||||||| | || || || | ||||| | || |||| Sbjct 1885173 ATTCAAAAGGAATCCACTTTGCACTTGGTCCTTAGATTGAGAGGTGGTT 1885221 Score = 145 bits (160), Expect = 6e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| |||||||| || || || ||||| || ||||| | ||||| ||| || | Sbjct 1884537 ATGCAAATCTTTGTTAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCCTCT 1884596 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| ||| |||||||||||||| ||||||||||| |||||| Sbjct 1884597 GACACTATTGACAACGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCAGATCAA 1884656 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || ||||| || ||||| ||||| ||| | ||| | || || |||||| Sbjct 1884657 CAAAGATTGATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACCTTGTCTGACTACAAC 1884716 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||| || ||||| | || || || | ||||| | || ||| Sbjct 1884717 ATTCAAAAGGAGTCCACTTTGCACTTGGTCCTTAGATTGAGAGGTGGT 1884764 Score = 141 bits (156), Expect = 8e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || ||||| || || || ||||| || ||||| | ||||| ||| || | Sbjct 1884765 ATGCAAATCTTCGTTAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCCTCT 1884824 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| ||| |||||||||||||| ||||||||||| |||||| Sbjct 1884825 GACACTATTGACAACGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCAGATCAA 1884884 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || ||||| || ||||| ||||| ||| | ||| | || || |||||| Sbjct 1884885 CAAAGATTGATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACCTTGTCTGACTACAAC 1884944 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||| || ||||| | || || || | ||||| | || ||| Sbjct 1884945 ATTCAAAAGGAGTCCACTTTGCACTTGGTCCTTAGATTGAGAGGTGGT 1884992 >seq10 Length=744508 Score = 89.7 bits (98), Expect = 4e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 117080 TGTCGAAGGCATTTTCTTTTCAGGCAGTTTTGCTGCCATATTTTTTATCAAGACCAAAGG 117139 ||| |||||||||||||| || ||| ||||||| | || || | | || | | ||| Sbjct 46051 TGTTGAAGGCATTTTCTTCTCGGGCTCTTTTGCTTCTATTTTCTGGTTGAAAAAAAGAGG 45992 Query 117140 TCTAATGCCGGGTCTAACGTTTAGCAACGAATTAATATCGCGTGACGAAGGTTTACACAC 117199 | | |||||||| | |||||| |||||||| || | | ||||||||||| ||||| Sbjct 45991 TTTGATGCCGGGCTTGACGTTTTCTAACGAATTGATCTGCAGAGACGAAGGTTTGCACAC 45932 Query 117200 CGATTTTGCGTGCATGT 117216 ||| ||||| ||| ||| Sbjct 45931 CGACTTTGCTTGCTTGT 45915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727774920860