Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03-
01] 44 sequences; 16,719,687 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq6 149 5e-31
seq4 147 2e-30
seq1 147 2e-30
seq10 89.7 4e-13
>seq6
Length=1504906
Score = 149 bits (164), Expect = 5e-31
Identities = 165/220 (75%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286
||| ||||||||||| || ||||| || | || | ||||| ||| | |||| ||| |
Sbjct 99479 TTTCGTTAAAACTTTGACTGGTAAGACTATTACCTTGGAAGTTGAATCTTCCGACACCAT 99538
Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346
||| || ||||| || ||||||||||| || ||||| ||||| ||||||||| | |
Sbjct 99539 TGACAATGTCAAATCTAAGATTCAAGACAAAGAAGGTATCCCACCTGATCAACAAAGATT 99598
Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
|| ||||| || || || ||||| ||| | | ||| | || || ||||| ||||||||
Sbjct 99599 GATCTTTGCTGGTAAGCAATTAGAAGATGGCAGAACCTTGTCTGACTACAATATTCAAAA 99658
Query 22407 AGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||||||| | || || |||||| ||||| | || |||
Sbjct 99659 GGAATCCACCTTGCACTTGGTTTTGAGATTGAGAGGTGGT 99698
>seq4
Length=1632271
Score = 147 bits (162), Expect = 2e-30
Identities = 173/234 (74%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272
|| |||||||||||||| || ||||| | ||||||||||| | || | ||||||||
Sbjct 76713 GTCAAGATGCAAATTTTCGTCAAAACCCTTACCGGTAAAACCATTACCTTGGAAGTGGAG 76654
Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332
|| | || ||| | ||| || ||||| || ||||||||||| || |||||||||||
Sbjct 76653 TCCTCGGACACCATTGACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATTCCACCA 76594
Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392
|| |||||| | | || ||||| || || ||||| || || | | ||| | |||||
Sbjct 76593 GACCAACAAAGATTGATCTTTGCTGGTAAGCAGTTGGAAGACGGCAGAACCTTGTCCGAC 76534
Query 22393 TACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||| ||||| |||||||| | || || || | ||||| | || |||
Sbjct 76533 TACAACATCCAAAAGGAATCCACTTTGCACTTGGTCCTCAGATTGAGAGGTGGT 76480
Score = 86.0 bits (94), Expect = 5e-12
Identities = 138/194 (71%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 129117 CAAGTATTTGTTTATTACTTGAAAGTCACCCGCCAAAACGCGCC--GAACGTAAATGTTG 129174
||||||| ||| | || |||||| ||||| |||||||| | | ||| ||||||||
Sbjct 1009901 CAAGTATGGGTTCACTATTTGAAACTCACCGGCCAAAACTCTTCTGGAA--TAAATGTTA 1009844
Query 129175 TTGGTGAACGGCTCAAACGATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGC 129234
|||| | || || || |||| |||| || || ||||||| || | || || |||
Sbjct 1009843 GAGGTGTATGGTTCGAAACATTCGTTGTAACCCAAGATTTGAGAGGTGGAAGCAGTTGGC 1009784
Query 129235 ATGTAAGCCACGCAAAGCGAGTTTCGCAAACCGTGCTGTTTAATGTCtttttttAATTGT 129294
|| ||| || | | ||||||| ||||||||||| |||| | ||| ||||| |
Sbjct 1009783 ATAGGAGCAACCAACAAAGAGTTTCTCAAACCGTGCTTCTTAACTT-TTTGTTTAAGAGA 1009725
Query 129295 GTCC-AGTCCCACA 129307
||| |||||||||
Sbjct 1009724 ATCCCAGTCCCACA 1009711
>seq1
Length=3127730
Score = 147 bits (162), Expect = 2e-30
Identities = 170/229 (74%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || ||||| || || || ||||| || ||||| | ||||| ||| || |
Sbjct 1884993 ATGCAAATCTTCGTTAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCCTCT 1885052
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | |||| ||| |||||||||||||| ||||||||||| ||||||
Sbjct 1885053 GACACTATTGACAACGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCAGATCAA 1885112
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || ||||| || ||||| ||||| ||| | ||| | || || ||||||
Sbjct 1885113 CAAAGATTGATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACCTTGTCTGACTACAAC 1885172
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTT 22447
|||||||| |||||||| | || || || | ||||| | || ||||
Sbjct 1885173 ATTCAAAAGGAATCCACTTTGCACTTGGTCCTTAGATTGAGAGGTGGTT 1885221
Score = 145 bits (160), Expect = 6e-30
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| |||||||| || || || ||||| || ||||| | ||||| ||| || |
Sbjct 1884537 ATGCAAATCTTTGTTAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCCTCT 1884596
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | |||| ||| |||||||||||||| ||||||||||| ||||||
Sbjct 1884597 GACACTATTGACAACGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCAGATCAA 1884656
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || ||||| || ||||| ||||| ||| | ||| | || || ||||||
Sbjct 1884657 CAAAGATTGATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACCTTGTCTGACTACAAC 1884716
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||| || ||||| | || || || | ||||| | || |||
Sbjct 1884717 ATTCAAAAGGAGTCCACTTTGCACTTGGTCCTTAGATTGAGAGGTGGT 1884764
Score = 141 bits (156), Expect = 8e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || ||||| || || || ||||| || ||||| | ||||| ||| || |
Sbjct 1884765 ATGCAAATCTTCGTTAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCCTCT 1884824
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | |||| ||| |||||||||||||| ||||||||||| ||||||
Sbjct 1884825 GACACTATTGACAACGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCAGATCAA 1884884
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || ||||| || ||||| ||||| ||| | ||| | || || ||||||
Sbjct 1884885 CAAAGATTGATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACCTTGTCTGACTACAAC 1884944
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||| || ||||| | || || || | ||||| | || |||
Sbjct 1884945 ATTCAAAAGGAGTCCACTTTGCACTTGGTCCTTAGATTGAGAGGTGGT 1884992
>seq10
Length=744508
Score = 89.7 bits (98), Expect = 4e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 117080 TGTCGAAGGCATTTTCTTTTCAGGCAGTTTTGCTGCCATATTTTTTATCAAGACCAAAGG 117139
||| |||||||||||||| || ||| ||||||| | || || | | || | | |||
Sbjct 46051 TGTTGAAGGCATTTTCTTCTCGGGCTCTTTTGCTTCTATTTTCTGGTTGAAAAAAAGAGG 45992
Query 117140 TCTAATGCCGGGTCTAACGTTTAGCAACGAATTAATATCGCGTGACGAAGGTTTACACAC 117199
| | |||||||| | |||||| |||||||| || | | ||||||||||| |||||
Sbjct 45991 TTTGATGCCGGGCTTGACGTTTTCTAACGAATTGATCTGCAGAGACGAAGGTTTGCACAC 45932
Query 117200 CGATTTTGCGTGCATGT 117216
||| ||||| ||| |||
Sbjct 45931 CGACTTTGCTTGCTTGT 45915
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727774920860
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |