Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq1 187 5e-42 seq4 183 6e-41 seq6 143 5e-29 >seq1 Length=3127730 Score = 187 bits (206), Expect = 5e-42 Identities = 169/213 (79%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| | |||||||| ||||| ||||| || || || | || || ||||||||| Sbjct 1884745 ACCAAGTGCAAAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTACCATCTTCT 1884686 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 || || || || || || || | ||||||||| || |||||||| ||||||||||||||| Sbjct 1884685 AATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCCTTGTCTTGA 1884626 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||||| ||||||| || || ||||| | ||||| |||||||| |||||||| || Sbjct 1884625 ATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCAACTTCCAAAGTGATGGTCTTA 1884566 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || || | |||||| || || || ||||||||| Sbjct 1884565 CCAGTCAAGGTCTTAACAAAGATTTGCATTATG 1884533 Score = 183 bits (202), Expect = 6e-41 Identities = 166/209 (79%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| | |||||||| ||||| ||||| || || || | || || ||||||||| Sbjct 1884973 ACCAAGTGCAAAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTACCATCTTCT 1884914 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 || || || || || || || | ||||||||| || |||||||| ||||||||||||||| Sbjct 1884913 AATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCCTTGTCTTGA 1884854 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||||| ||||||| || || ||||| | ||||| |||||||| |||||||| || Sbjct 1884853 ATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCAACTTCCAAAGTGATGGTCTTA 1884794 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || | |||||| ||||| || ||||| Sbjct 1884793 CCAGTCAAGGTCTTAACGAAGATTTGCAT 1884765 Score = 179 bits (198), Expect = 7e-40 Identities = 165/209 (79%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| | ||||| || ||||| ||||| || || || | || || ||||||||| Sbjct 1885201 ACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTACCATCTTCT 1885142 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 || || || || || || || | ||||||||| || |||||||| ||||||||||||||| Sbjct 1885141 AATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCCTTGTCTTGA 1885082 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||||| ||||||| || || ||||| | ||||| |||||||| |||||||| || Sbjct 1885081 ATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCAACTTCCAAAGTGATGGTCTTA 1885022 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || | |||||| ||||| || ||||| Sbjct 1885021 CCAGTCAAGGTCTTAACGAAGATTTGCAT 1884993 >seq4 Length=1632271 Score = 183 bits (202), Expect = 6e-41 Identities = 166/209 (79%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| | ||||| || ||||||||||| || ||||| | || || || ||||| Sbjct 76499 ACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCGTCTTCC 76558 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 |||||||| || || || || | |||||||||||| |||||||| ||||| ||||||||| Sbjct 76559 AACTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCTTTGTCTTGA 76618 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| | ||||| || |||||||| | || || ||||||||||| |||||||| Sbjct 76619 ATCTTGGATTTGACATTGTCAATGGTGTCCGAGGACTCCACTTCCAAGGTAATGGTTTTA 76678 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || ||||| |||||||| || ||||| Sbjct 76679 CCGGTAAGGGTTTTGACGAAAATTTGCAT 76707 >seq6 Length=1504906 Score = 143 bits (158), Expect = 5e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| | ||||| || ||||| || || || || || | || || ||||| Sbjct 99683 CAAAACCAAGTGCAAGGTGGATTCCTTTTGAATATTGTAGTCAGACAAGGTTCTGCCATC 99624 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 |||||| ||||| || || || || | ||||||||| || ||||| || ||||| ||||| Sbjct 99623 TTCTAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGGATACCTTCTTTGTC 99564 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||||||| | ||||| || |||||||| | ||||| ||||||||||| || || Sbjct 99563 TTGAATCTTAGATTTGACATTGTCAATGGTGTCGGAAGATTCAACTTCCAAGGTAATAGT 99504 Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452 || || || | || || ||||| Sbjct 99503 CTTACCAGTCAAAGTTTTAACGAA 99480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621893107680