Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq4 107 2e-18 seq6 105 6e-18 seq1 91.5 1e-13 >seq4 Length=1632271 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||| ||||| |||||||| ||| || || | ||||| | || |||||| Sbjct 76511 GTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCGTCTTCCAACTGCTTACCA 76570 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| | | |||||||| || ||||| ||||||||||| |||||| ||| Sbjct 76571 GCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCTTTGTCTTGAATCTTGGATTTG 76630 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| | ||| || || |||| ||| | ||||| ||||| || ||| Sbjct 76631 ACATTGTCAATGGTGTCCGAGGACTCCACTTCCAAGGTAATGGTTTTACCGGTAAGGGTT 76690 Query 114366 TTTACAAAAATCTGCAT 114382 || || ||||| ||||| Sbjct 76691 TTGACGAAAATTTGCAT 76707 >seq6 Length=1504906 Score = 105 bits (116), Expect = 6e-18 Identities = 148/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 114167 TCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGA 114226 ||||||||| || || | || ||||| |||||||| ||||| || || || | Sbjct 99686 TCTCAAAACCAAGTGCAAGGTGGATTCCTTTTGAATATTGTAGTCAGACAAGGTTCTGCC 99627 Query 114227 ATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286 |||||| | ||| |||||||| |||| | | ||||| || || || || |||||||| Sbjct 99626 ATCTTCTAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGGATACCTTCTTT 99567 Query 114287 GTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346 ||| |||||| ||| | | |||| |||||||| ||||| || |||| ||| | Sbjct 99566 GTCTTGAATCTTAGATTTGACATTGTCAATGGTGTCGGAAGATTCAACTTCCAAGGTAAT 99507 Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAA 114374 || || || |||| |||||| || ||| Sbjct 99506 AGTCTTACCAGTCAAAGTTTTAACGAAA 99479 >seq1 Length=3127730 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | | ||| | || || || | || || || |||||||||||||| || Sbjct 1884766 ATACCACCTCTCAATCTAAGGACCAAGTGCAAAGTGGACTCCTTTTGAATGTTGTAGTCA 1884707 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || | | |||||| | |||||||||||| | || | | ||||| || || Sbjct 1884706 GACAAGGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGT 1884647 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| ||||| ||||||| || | | |||| ||||| | |||||| Sbjct 1884646 GGAATACCTTCCTTGTCTTGAATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCA 1884587 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || || || |||| || || ||||| || ||||| Sbjct 1884586 ACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTAACAAAGATTTGCAT 1884537 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||| |||||||||||||| || || || | | |||||| | |||||||||| Sbjct 1885189 GTGGATTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAATTGTTTACCA 1885130 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || | || | | ||||| || || ||||| ||||| ||||| ||||||| || Sbjct 1885129 GCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCCTTGTCTTGAATCTTTGACTTG 1885070 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| ||||| | |||||| || |||| || | || || || |||| || Sbjct 1885069 ACGTTGTCAATAGTGTCAGAGGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAGGTC 1885010 Query 114366 TTTACAAAAATCTGCAT 114382 || || || || ||||| Sbjct 1885009 TTAACGAAGATTTGCAT 1884993 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | | ||| | || || || | || || || |||||||||||||| || Sbjct 1884994 ATACCACCTCTCAATCTAAGGACCAAGTGCAAAGTGGACTCCTTTTGAATGTTGTAGTCA 1884935 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || | | |||||| | |||||||||||| | || | | ||||| || || Sbjct 1884934 GACAAGGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGT 1884875 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| ||||| ||||||| || | | |||| ||||| | |||||| Sbjct 1884874 GGAATACCTTCCTTGTCTTGAATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCA 1884815 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || || || |||| || || || || || ||||| Sbjct 1884814 ACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 1884765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420134174702928