Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq10 125 1e-23 seq5 91.5 3e-13 >seq10 Length=744508 Score = 125 bits (138), Expect = 1e-23 Identities = 553/866 (64%), Gaps = 12/866 (1%) Strand=Plus/Minus Query 42285 ATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCC 42344 ||| || |||| || || ||| |||||||||||||| | || |||||| ||| Sbjct 46491 ATCAAGTACCATGAGATTTGGCAGATGTACAAGAAGGCCGAAGCGTCGTTCTGGACAGCC 46432 Query 42345 GAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGT---CTGAGAACGAA 42401 ||||||||||| || ||||||| | || |||| | | || | || ||||| Sbjct 46431 GAGGAGATTGATTTGTCCAAGGATTTGCACGACTGGAACAACCGGTTGACGGAAAACGAG 46372 Query 42402 AAGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAG 42461 ||||||| | | |||| || || || || || ||||| || ||||| ||| Sbjct 46371 CGGTTTTTCATTTCTCGGGTTTTGGCGTTTTTTGCTGCGTCGGACGGAATTGTCAACGAG 46312 Query 42462 AACCTGGCC-ACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGG 42520 ||| ||| | | || || || || ||| | ||||| | |||||||| Sbjct 46311 AACTTGGTGGAGAACTTTTCTGCC-GAAGTTCAGGTCCCAGAGGCCAAGTTTTTCTACGG 46253 Query 42521 CTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTA 42580 |||||||| || ||||| | || || || ||| | | || | ||||||| Sbjct 46252 GTTCCAGATCATGATGGAGAATATCCATTCGGAAACATACTCGCTATTGATTGACACGTA 46193 Query 42581 CATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCAT 42640 || ||| || ||| | | ||||||| ||||| ||||| || || || Sbjct 46192 TGTCAAGGACCCTAAGGAGTCTGAGTTTTTGTTCAATGCCATTGAGACAATTCCACAAAT 46133 Query 42641 CAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGA-GAGTCCCGACGCAACGTTCGGCG 42699 |||| | ||||| |||||||| | | |||||| | || || | || ||| | | Sbjct 46132 CAAGCAAAAGGCCGACTGGGCCTTGAGATGGATCAACGACGACC-AGGCCTTGTTTGCTG 46074 Query 42700 AGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCA 42759 | || |||| |||||| | || || || ||||| |||||||||||| | || || || | Sbjct 46073 AAAGATTGGTTGCCTTTGCTGCTGTTGAAGGCATTTTCTTCTCGGGCTCTTTTGCTTCTA 46014 Query 42760 TCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATC 42818 | |||||| | || | | |||| | |||||| || | || || || |||||| | ||| Sbjct 46013 TTTTCTGGTTGAAAAAAAGAGGT-TTGATGCCGGGCTTGACGTTTTCTAACGAATTGATC 45955 Query 42819 AGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGG 42878 |||| ||||| || |||| | |||||||| ||| | |||| || ||| | | Sbjct 45954 TGCAGAGACGAAGGTTTGCACACCGACTTTGCTTGCTTGTTGTTTTC---TCACTTGCAG 45898 Query 42879 CACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAG 42938 |||| || ||| ||| | |||||||| || || || | || || || Sbjct 45897 AACAAACCAGACCCGGAAATTGTCGAGAAAATCATCACCGAAGCTGTCAACATTGAAAAA 45838 Query 42939 GAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGC 42998 || | | | || | | |||| || ||| || | ||||||||| | | | ||||| Sbjct 45837 GACTACTTTACCGACGCCTTGCCAGTTTCCTTGTTGGGCATGAACTGCAAATTGATGTGT 45778 Query 42999 AAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTAC 43058 | ||| | | | | ||||||| | || | ||||| || | | ||| Sbjct 45777 CAATACGTGGAATTCTGCGCCGACAGATTGTTGGTCGCCTTGGGTAACAACAAGGTTTAC 45718 Query 43059 AACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTT 43118 ||| | || || || |||||||| ||||| || |||| || || ||||||||| Sbjct 45717 AACGTTACCAATCCATTTGATTTTATGGAAAACATTTCCTTGGCCGGAAAAACCAACTTT 45658 Query 43119 TTCGAGAAGCGCGTCGCCGACTACCA 43144 ||||| || | ||| | || || || Sbjct 45657 TTCGAAAAAAGAGTCTCTGATTATCA 45632 >seq5 Length=1624186 Score = 91.5 bits (100), Expect = 3e-13 Identities = 176/257 (68%), Gaps = 2/257 (1%) Strand=Plus/Plus Query 42610 TGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACT 42669 ||||||| ||||| || || || || ||||||| |||| || |||||||| | | Sbjct 610162 TGTTCAATGCCATCGAAACTATACCGAGCATCAAAGAGAAAGCTGACTGGGCTTTACGTT 610221 Query 42670 GGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGG 42729 ||||| | | |||| ||| | || | || || |||||| | ||||| || | Sbjct 610222 GGATCAACGACGACAACGCTTTGTTTGCAGAACGTCTTGTTGCCTTTGCTGCCGTAGAAG 610281 Query 42730 GCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATG 42788 | || || ||||| || | || || || ||||| ||| | || | | |||| || ||| Sbjct 610282 GAATATTTTTCTCAGGATCGTTTGCTTCAATCTTTTGGTTGAAAAAAAGAGGTCTC-ATG 610340 Query 42789 CCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTT 42848 || || | || || || ||||| | || ||||||||||| || |||||| || ||| Sbjct 610341 CCAGGTTTGACGTTTTCTAACGAGTTGATTAGCAGGGACGAAGGCTTGCATACTGATTTT 610400 Query 42849 GCCTGCCTCCTGTTCTC 42865 || || || ||| ||| Sbjct 610401 GCGTGTCTATTGTACTC 610417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338680613440