Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq1 183 3e-41 >seq1 Length=3127730 Score = 183 bits (202), Expect = 3e-41 Identities = 397/589 (67%), Gaps = 19/589 (3%) Strand=Plus/Minus Query 20189 TTGTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGG-GTCTAAGACCAGTAAC 20247 ||||| | |||||| || |||| ||||| || ||||| || ||| | | | | || Sbjct 2169201 TTGTACACGTGGGCGTCACCCATGGTGTGTATGAACTCACCACAGTCCATGTC-ACACAC 2169143 Query 20248 ATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACC 20307 || |||| ||| | |||| || | ||| ||||| || |||||||| ||||| || Sbjct 2169142 CTGGGCAATCATCTTGGTTAGAAGAGCATACGACGCAATATTGAAAGGAACACCCAAGCC 2169083 Query 20308 CATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCA------CCGTC--------A 20353 ||| || | || ||||| || || |||| || |||| | || || | Sbjct 2169082 CATATCGCAAGATCTCTGGTATAGGAGACACGAGAGCTGAGGTCTGCCATCTTTAGGAAA 2169023 Query 20354 GCT-ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGC 20412 | | ||||| || |||| |||| || || || |||||||||||| | || || | Sbjct 2169022 GTTTACATAGAACTGACTAAACACATGGCAAGGAGGAAGCGCCATCTTAGGGAAATCTGG 2168963 Query 20413 CGGGTTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCAC 20472 |||||||| ||| |||| |||||||||||||||| ||| || | || | | || | Sbjct 2168962 TGGGTTCCAAGCAGACATGATGATTCTTCTATCGTACGGGTTGGTCTTCAATTTATGGAT 2168903 Query 20473 AATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGC 20532 || | || ||||| || | || ||||| ||||||| ||||| | | ||| | Sbjct 2168902 AACCTCCGCTAATTGATCCACGCCTTGGCCATTATAGTCGGCATCACAATTCTTGTATTC 2168843 Query 20533 CGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTG 20592 || ||||| || ||||||||||| || |||||||| || ||||| ||||| || | | Sbjct 2168842 TGCTCCAAAATGTCTCCACTGGAACCCATAAACAGGACCTAAATCGCCCTCTCTATTCTT 2168783 Query 20593 CGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGAC-TC 20651 | || || | | | || |||| ||| |||||| ||||| ||||| || | Sbjct 2168782 TGTCAACCCAATACTGTCTAGATACTCTCTGCTTCCATTTCCTTCCCAGATCTTAACGCC 2168723 Query 20652 CTGTTCTTGAAAGCTCCCTGGAGTCAGTACTCCCCTTCAGAAACCAAAGCAGCTCTTGCA 20711 |||||| ||||||| | || |||||| | ||||| | ||||||||| ||||| | Sbjct 2168722 CTGTTC-CGAAAGCTTCTTGCCGTCAGTGCAGCCCTTAATAAACCAAAGAAGCTCCAAGA 2168664 Query 20712 CTACGCCTCGCCAAAACACCCGCTTTGTGGTTAGTAAGGGAAAGTGGTC 20760 | ||| |||| ||| ||| ||||| | || ||||| ||||| Sbjct 2168663 TAATGCCCTTGGAAAATACCTTCTTGGTGGTCAACAAAGGAAACTGGTC 2168615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441372557244960