Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03-
01] 44 sequences; 16,719,687 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq1 96.9 4e-15
>seq1
Length=3127730
Score = 96.9 bits (106), Expect = 4e-15
Identities = 163/231 (71%), Gaps = 4/231 (2%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||| || | | ||||| ||||| ||| |||||||||||| ||||| ||||
Sbjct 1884764 ACCACCTCTCAATCTAAGGACCAAGTGCAAAGTGGACTCCTTTTGAATGTTGTAGTCAGA 1884705
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| || | | || |||| || |||||||| || || | || || || || | |||
Sbjct 1884704 CAAGGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGG 1884645
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCC 42158
| | ||||||| | ||| | |||| |||| ||| | | | ||||| |||||
Sbjct 1884644 AATACCTTCCTTGT-CTTGAATCTTTGACTTGA-CGTTGTCAATAGTGTCAGAGGATTCA 1884587
Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209
|| || | |||||||| || || || | ||||| |||||||||||||||
Sbjct 1884586 ACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTAACAAAGATTTGCATT 1884536
Score = 89.7 bits (98), Expect = 6e-13
Identities = 161/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||| || | | ||||| ||||| ||| |||||||||||| ||||| ||||
Sbjct 1884992 ACCACCTCTCAATCTAAGGACCAAGTGCAAAGTGGACTCCTTTTGAATGTTGTAGTCAGA 1884933
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| || | | || |||| || |||||||| || || | || || || || | |||
Sbjct 1884932 CAAGGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGG 1884873
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCC 42158
| | ||||||| | ||| | |||| |||| ||| | | | ||||| |||||
Sbjct 1884872 AATACCTTCCTTGT-CTTGAATCTTTGACTTGA-CGTTGTCAATAGTGTCAGAGGATTCA 1884815
Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| || | |||||||| || || || | ||||| || |||||||||||
Sbjct 1884814 ACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 1884765
Score = 87.8 bits (96), Expect = 2e-12
Identities = 164/236 (69%), Gaps = 4/236 (2%)
Strand=Plus/Minus
Query 41975 TTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTA 42034
||| | ||| ||||| || | | ||||| ||||| ||| ||||||||||| |||||
Sbjct 1885226 TTAGCAACCACCTCTCAATCTAAGGACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTA 1885167
Query 42035 ATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTC 42094
|||| || || | | || |||| || |||||||| || || | || || || ||
Sbjct 1885166 GTCAGACAAGGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATC 1885107
Query 42095 GGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTC 42152
| ||| | | ||||||| | ||| | |||| |||| ||| | | | |||||
Sbjct 1885106 TGGTGGAATACCTTCCTTGT-CTTGAATCTTTGACTTGA-CGTTGTCAATAGTGTCAGAG 1885049
Query 42153 GATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
||||| || || | |||||||| || || || | ||||| || |||||||||||
Sbjct 1885048 GATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 1884993
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543212501232960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |