Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 4e-15 >seq1 Length=3127730 Score = 96.9 bits (106), Expect = 4e-15 Identities = 163/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| ||||| || | | ||||| ||||| ||| |||||||||||| ||||| |||| Sbjct 1884764 ACCACCTCTCAATCTAAGGACCAAGTGCAAAGTGGACTCCTTTTGAATGTTGTAGTCAGA 1884705 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || | | || |||| || |||||||| || || | || || || || | ||| Sbjct 1884704 CAAGGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGG 1884645 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCC 42158 | | ||||||| | ||| | |||| |||| ||| | | | ||||| ||||| Sbjct 1884644 AATACCTTCCTTGT-CTTGAATCTTTGACTTGA-CGTTGTCAATAGTGTCAGAGGATTCA 1884587 Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 || || | |||||||| || || || | ||||| ||||||||||||||| Sbjct 1884586 ACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTAACAAAGATTTGCATT 1884536 Score = 89.7 bits (98), Expect = 6e-13 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| ||||| || | | ||||| ||||| ||| |||||||||||| ||||| |||| Sbjct 1884992 ACCACCTCTCAATCTAAGGACCAAGTGCAAAGTGGACTCCTTTTGAATGTTGTAGTCAGA 1884933 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || | | || |||| || |||||||| || || | || || || || | ||| Sbjct 1884932 CAAGGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGG 1884873 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCC 42158 | | ||||||| | ||| | |||| |||| ||| | | | ||||| ||||| Sbjct 1884872 AATACCTTCCTTGT-CTTGAATCTTTGACTTGA-CGTTGTCAATAGTGTCAGAGGATTCA 1884815 Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || | |||||||| || || || | ||||| || ||||||||||| Sbjct 1884814 ACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 1884765 Score = 87.8 bits (96), Expect = 2e-12 Identities = 164/236 (69%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 41975 TTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTA 42034 ||| | ||| ||||| || | | ||||| ||||| ||| ||||||||||| ||||| Sbjct 1885226 TTAGCAACCACCTCTCAATCTAAGGACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTA 1885167 Query 42035 ATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTC 42094 |||| || || | | || |||| || |||||||| || || | || || || || Sbjct 1885166 GTCAGACAAGGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATC 1885107 Query 42095 GGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTC 42152 | ||| | | ||||||| | ||| | |||| |||| ||| | | | ||||| Sbjct 1885106 TGGTGGAATACCTTCCTTGT-CTTGAATCTTTGACTTGA-CGTTGTCAATAGTGTCAGAG 1885049 Query 42153 GATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| || || | |||||||| || || || | ||||| || ||||||||||| Sbjct 1885048 GATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 1884993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543212501232960