Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq4 102 8e-17 seq1 100 3e-16 seq10 84.2 2e-11 >seq4 Length=1632271 Score = 102 bits (112), Expect = 8e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| || || | || | || ||||| ||||| |||||||| || | Sbjct 76480 ACCACCTCTCAATCTGAGGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGA 76539 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| | ||||||| | |||||| || ||| | || | | || ||||| || || Sbjct 76540 CAAGGTTCTGCCGTCTTCCAACTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGG 76599 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| |||||||| ||||| || || || ||| || | || || || ||||| Sbjct 76600 AATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCCGAGGACTCCAC 76659 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 ||| | || | ||| || ||||| | ||||| |||||||||||||| || Sbjct 76660 TTCCAAGGTAATGGTTTTACCGGTAAGGGTTTTGACGAAAATTTGCATCTT 76710 Score = 89.7 bits (98), Expect = 5e-13 Identities = 122/168 (73%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 153999 AAATC-TTCAACCAAGTGCTGGTTAATTACTTGAAAATCGCCGGCCAATACGCGGCGCAC 154057 ||||| |||||| |||| |||| | || |||||| || |||||||| || | | Sbjct 1009912 AAATCCTTCAAC-AAGTATGGGTTCACTATTTGAAACTCACCGGCCAAAACTCTTCTGGA 1009854 Query 154058 ATACAAATTGCTGGTGAACGGCTCGAACGATTCGTTGTTGCCTAATATTTGAGCTGTAGT 154117 ||| | || |||| | || ||||| ||||||||| || || ||||||| || | Sbjct 1009853 ATAAATGTTAGAGGTGTATGGTTCGAAACATTCGTTGTAACCCAAGATTTGAGAGGTGGA 1009794 Query 154118 TGCTGTGGGCATATACGCCACCAACAAAGAGTTTCGCAAACCGTGTTT 154165 || || |||||| || |||||||||||||||| ||||||||| || Sbjct 1009793 AGCAGTTGGCATAGGAGCAACCAACAAAGAGTTTCTCAAACCGTGCTT 1009746 >seq1 Length=3127730 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | ||||||||| || | || | || ||||| |||||||||||||| || | Sbjct 1885220 ACCACCTCTCAATCTAAGGACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCAGA 1885161 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| | | ||||| | || || || ||| |||| | | || || || || || Sbjct 1885160 CAAGGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGG 1885101 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || ||||| || ||| ||| || || | || ||| || || || Sbjct 1885100 AATACCTTCCTTGTCTTGAATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCAAC 1885041 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | ||| | |||||| || ||||| || || ||||| |||||||| Sbjct 1885040 TTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 1884993 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | ||||||||| || | || | || || || |||||||||||||| || | Sbjct 1884992 ACCACCTCTCAATCTAAGGACCAAGTGCAAAGTGGACTCCTTTTGAATGTTGTAGTCAGA 1884933 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| | | ||||| | || || || ||| |||| | | || || || || || Sbjct 1884932 CAAGGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGG 1884873 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || ||||| || ||| ||| || || | || ||| || || || Sbjct 1884872 AATACCTTCCTTGTCTTGAATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCAAC 1884813 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | ||| | |||||| || ||||| || || ||||| |||||||| Sbjct 1884812 TTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 1884765 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | ||||||||| || | || | || || || |||||||||||||| || | Sbjct 1884764 ACCACCTCTCAATCTAAGGACCAAGTGCAAAGTGGACTCCTTTTGAATGTTGTAGTCAGA 1884705 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| | | ||||| | || || || ||| |||| | | || || || || || Sbjct 1884704 CAAGGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGG 1884645 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || ||||| || ||| ||| || || | || ||| || || || Sbjct 1884644 AATACCTTCCTTGTCTTGAATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCAAC 1884585 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 ||| | ||| | |||||| || ||||| || || || || ||||||||| Sbjct 1884584 TTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTAACAAAGATTTGCATT 1884536 >seq10 Length=744508 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 132829 ACAAACACGCAAAGTTTGTATGCAAACCTTCGTCTCTTGATATAAGCTCGTTGCTGAACG 132888 |||| || ||||||| || ||||||||||||||||| | || | ||||| |||| Sbjct 45915 ACAAGCAAGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAATTCGTTAGAAAACG 45974 Query 132889 TGAGGCCGGGCATGATGCCTTTTGTTTTAATAAAAAATATTGCCGCAAAACTGCCCGAAA 132948 | | ||| ||||| | ||| || |||| | | || || | |||||| |||||| | Sbjct 45975 TCAAGCCCGGCATCAAACCTCTTTTTTTCAACCAGAAAATAGAAGCAAAAGAGCCCGAGA 46034 Query 132949 AGAACACGCCTTCTACAATTGCAAAAGCCACCATTC 132984 |||| | |||||| ||| ||||| || |||| || Sbjct 46035 AGAAAATGCCTTCAACAGCAGCAAAGGCAACCAATC 46070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644525195360