Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq6 96.9 3e-15 seq4 96.9 3e-15 >seq6 Length=1504906 Score = 96.9 bits (106), Expect = 3e-15 Identities = 165/232 (71%), Gaps = 7/232 (3%) Strand=Plus/Minus Query 138378 GTAGCCGCAGCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTT 138437 |||| ||| || |||| ||| | |||||| || || | | | || ||||||||||| || Sbjct 99706 GTAGAAGCA-CCACCTCTCAATCTCAAAACCAAGTGCAAGGTGGATTCCTTTTGAATATT 99648 Query 138438 GTAGTCGCTCATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTT 138496 |||||| || || | || | || || | ||| ||||| | | |||| | | |||| Sbjct 99647 GTAGTCAGACAAGGTTCTGCCA-TCTTCTAATTGCTTACCAGCAAAGATCAATCTTTGTT 99589 Query 138497 GGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTT--AATTGTTCCACGGTGTC 138554 | || || || |||||||||||||| ||| | || | ||| |||| || | |||||| Sbjct 99588 GATCAGGTGGGATACCTTCTTTGTC-TTGAATCTTAGATTTGACATTG-TCAATGGTGTC 99531 Query 138555 GGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAA 138606 || || || || || | || | || |||||||||| |||||| || ||| Sbjct 99530 GGAAGATTCAACTTCCAAGGTAATAGTCTTACCAGTCAAAGTTTTAACGAAA 99479 >seq4 Length=1632271 Score = 96.9 bits (106), Expect = 3e-15 Identities = 141/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || |||||||| |||||||||||| || || | ||| || | || ||||| | | Sbjct 76514 GATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCGTCTTCCAACTGCTTACCAGCA 76573 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTT--A 138538 |||| | | |||||||| || || |||||||||||||| ||| | || | ||| Sbjct 76574 AAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCTTTGTC-TTGAATCTTGGATTTGAC 76632 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 |||| || | |||||| | |||||||| || | || | |||||||| || || |||| Sbjct 76633 ATTG-TCAATGGTGTCCGAGGACTCCACTTCCAAGGTAATGGTTTTACCGGTAAGGGTTT 76691 Query 138599 TTACAAAAATCTGCAT 138614 | || ||||| ||||| Sbjct 76692 TGACGAAAATTTGCAT 76707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262127055680