Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03-
01] 44 sequences; 16,719,687 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq4 129 5e-25
seq6 104 2e-17
seq10 95.1 1e-14
seq1 95.1 1e-14
>seq4
Length=1632271
Score = 129 bits (142), Expect = 5e-25
Identities = 151/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|||| || |||||||||||||| || || ||| | |||| | || ||||| ||
Sbjct 76505 TGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCGTCTTCCAACTGC 76564
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || || | ||||||| ||| ||||| || ||||| |||||||| |||||||| ||
Sbjct 76565 TTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCTTTGTCTTGAATCTTG 76624
Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317
||||| || | |||||| || ||||| ||||| | |||| ||||| |||||
Sbjct 76625 GATTTGACATTGTCAATGGTGTCCGAGGACTCCACTTCCAAGGTAATGGTTTTACCGGTA 76684
Query 45318 AGAGTTTTTACAAAAATTTGCATC 45341
|| ||||| || ||||||||||||
Sbjct 76685 AGGGTTTTGACGAAAATTTGCATC 76708
>seq6
Length=1504906
Score = 104 bits (114), Expect = 2e-17
Identities = 147/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | |||| || ||||||||||| ||||| || || | |||| | |
Sbjct 99685 CTCAAAACCAAGTGCAAGGTGGATTCCTTTTGAATATTGTAGTCAGACAAGGTTCTGCCA 99626
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| || ||||| || || || | ||||||| ||| || || || || || ||||||||
Sbjct 99625 TCTTCTAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGGATACCTTCTTTG 99566
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
|||||||| || ||||| || | |||||||||||| || ||||| | ||||
Sbjct 99565 TCTTGAATCTTAGATTTGACATTGTCAATGGTGTCGGAAGATTCAACTTCCAAGGTAATA 99506
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAA 45332
|| || || || | |||||| || |||
Sbjct 99505 GTCTTACCAGTCAAAGTTTTAACGAAA 99479
>seq10
Length=744508
Score = 95.1 bits (104), Expect = 1e-14
Identities = 288/436 (66%), Gaps = 33/436 (8%)
Strand=Plus/Plus
Query 138105 TCaaaaaaaTTAGTTTTACCCTCCATGGATATGTTAGTCATAAAATTAAAAGGATTACTC 138164
|| ||||| || ||||| || ||| ||| ||||| |||||||| ||| ||||| |
Sbjct 45653 TCGAAAAAGTTGGTTTTTCCGGCCAAGGAAATGTTTTCCATAAAATCAAATGGATTGGTA 45712
Query 138165 GCCATAAAATGCTT-TGGCTGATTAAGATCGACAAGCAAACGATCGGCTACAAATTCAAT 138223
| | || ||| | | | ||| |||| | ||| | ||||| ||||| |
Sbjct 45713 ACGTTGTAAACCTTGTTGTTACCCAAGG-CGACCAACAATCTGTCGGCGCAGAATTCCAC 45771
Query 138224 GTATCGACACATCGATTCGGTGTTCATGCCCAACAA----ACTG-CAAGGCAACGCCGTT 138278
|||| |||||||| ||| | ||||||||||||||| |||| |||||| ||
Sbjct 45772 GTATTGACACATCAATTTGCAGTTCATGCCCAACAAGGAAACTGGCAAGGCGTCGG---- 45827
Query 138279 TTAAAAAATTCCTTTTCAATTTCTACCGCTTCGATAAACATGTCCAATATTCGTTCGGAC 138338
|||| | || |||||||| | || |||||| | | || ||| ||| |
Sbjct 45828 -TAAAGTAGTCTTTTTCAATGTTGACAGCTTCGGTGA---TG------ATT--TTCT--C 45873
Query 138339 GACAGTTTGTCGTGTTCGGGAATGTACTCATTGTAATA------CAAGCACGCAAAGTTG 138392
|||| ||| || || | || ||| || || | | |||||| ||||||| |
Sbjct 45874 GACAATTTC-CGGGT-CTGGTTTGTTCTGCAAGTGAGAAAACAACAAGCAAGCAAAGTCG 45931
Query 138393 GTGTGTAAACCTTCGTCGCGAGAGATAAGTTCGTTGCTAAACGTCAGCCCCGGCATGACG 138452
||||| ||||||||||| | |||| | |||||| |||||||| |||||||| |
Sbjct 45932 GTGTGCAAACCTTCGTCTCTGCAGATCAATTCGTTAGAAAACGTCAAGCCCGGCATCAAA 45991
Query 138453 CCTTTGGTCTTGATGTAAAAGATGGCCGCGAAACTGCCCGaaaaaaaaaCGCCTTCGACA 138512
||| | | || | | || || | || ||| |||||| || |||| |||||| |||
Sbjct 45992 CCTCTTTTTTTCAACCAGAAAATAGAAGCAAAAGAGCCCGAGAAGAAAATGCCTTCAACA 46051
Query 138513 ATAGCGAAAGCCACCA 138528
||| || || ||||
Sbjct 46052 GCAGCAAAGGCAACCA 46067
>seq1
Length=3127730
Score = 95.1 bits (104), Expect = 1e-14
Identities = 145/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|||| || ||||||||||| || || || || | |||| || ||| || ||||||
Sbjct 1885195 TGCAAAGTGGATTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAATTGT 1885136
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || || | ||||||| ||| || || || ||||| ||||| || |||||||| |||
Sbjct 1885135 TTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCCTTGTCTTGAATCTTT 1885076
Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316
|||| || | || | ||||| || || || ||||| | ||| | || || || ||
Sbjct 1885075 GACTTGA-CGTTGTCAATAGTGTCAGAGGATTCAACTTCCAAAGTGATGGTCTTACCAGT 1885017
Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340
| || || || || ||||||||
Sbjct 1885016 CAAGGTCTTAACGAAGATTTGCAT 1884993
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452002951398240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |