Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq4 129 5e-25 seq6 104 2e-17 seq10 95.1 1e-14 seq1 95.1 1e-14 >seq4 Length=1632271 Score = 129 bits (142), Expect = 5e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 |||| || |||||||||||||| || || ||| | |||| | || ||||| || Sbjct 76505 TGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCGTCTTCCAACTGC 76564 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || || | ||||||| ||| ||||| || ||||| |||||||| |||||||| || Sbjct 76565 TTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCTTTGTCTTGAATCTTG 76624 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 ||||| || | |||||| || ||||| ||||| | |||| ||||| ||||| Sbjct 76625 GATTTGACATTGTCAATGGTGTCCGAGGACTCCACTTCCAAGGTAATGGTTTTACCGGTA 76684 Query 45318 AGAGTTTTTACAAAAATTTGCATC 45341 || ||||| || |||||||||||| Sbjct 76685 AGGGTTTTGACGAAAATTTGCATC 76708 >seq6 Length=1504906 Score = 104 bits (114), Expect = 2e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | |||| || ||||||||||| ||||| || || | |||| | | Sbjct 99685 CTCAAAACCAAGTGCAAGGTGGATTCCTTTTGAATATTGTAGTCAGACAAGGTTCTGCCA 99626 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || ||||| || || || | ||||||| ||| || || || || || |||||||| Sbjct 99625 TCTTCTAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGGATACCTTCTTTG 99566 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 |||||||| || ||||| || | |||||||||||| || ||||| | |||| Sbjct 99565 TCTTGAATCTTAGATTTGACATTGTCAATGGTGTCGGAAGATTCAACTTCCAAGGTAATA 99506 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAA 45332 || || || || | |||||| || ||| Sbjct 99505 GTCTTACCAGTCAAAGTTTTAACGAAA 99479 >seq10 Length=744508 Score = 95.1 bits (104), Expect = 1e-14 Identities = 288/436 (66%), Gaps = 33/436 (8%) Strand=Plus/Plus Query 138105 TCaaaaaaaTTAGTTTTACCCTCCATGGATATGTTAGTCATAAAATTAAAAGGATTACTC 138164 || ||||| || ||||| || ||| ||| ||||| |||||||| ||| ||||| | Sbjct 45653 TCGAAAAAGTTGGTTTTTCCGGCCAAGGAAATGTTTTCCATAAAATCAAATGGATTGGTA 45712 Query 138165 GCCATAAAATGCTT-TGGCTGATTAAGATCGACAAGCAAACGATCGGCTACAAATTCAAT 138223 | | || ||| | | | ||| |||| | ||| | ||||| ||||| | Sbjct 45713 ACGTTGTAAACCTTGTTGTTACCCAAGG-CGACCAACAATCTGTCGGCGCAGAATTCCAC 45771 Query 138224 GTATCGACACATCGATTCGGTGTTCATGCCCAACAA----ACTG-CAAGGCAACGCCGTT 138278 |||| |||||||| ||| | ||||||||||||||| |||| |||||| || Sbjct 45772 GTATTGACACATCAATTTGCAGTTCATGCCCAACAAGGAAACTGGCAAGGCGTCGG---- 45827 Query 138279 TTAAAAAATTCCTTTTCAATTTCTACCGCTTCGATAAACATGTCCAATATTCGTTCGGAC 138338 |||| | || |||||||| | || |||||| | | || ||| ||| | Sbjct 45828 -TAAAGTAGTCTTTTTCAATGTTGACAGCTTCGGTGA---TG------ATT--TTCT--C 45873 Query 138339 GACAGTTTGTCGTGTTCGGGAATGTACTCATTGTAATA------CAAGCACGCAAAGTTG 138392 |||| ||| || || | || ||| || || | | |||||| ||||||| | Sbjct 45874 GACAATTTC-CGGGT-CTGGTTTGTTCTGCAAGTGAGAAAACAACAAGCAAGCAAAGTCG 45931 Query 138393 GTGTGTAAACCTTCGTCGCGAGAGATAAGTTCGTTGCTAAACGTCAGCCCCGGCATGACG 138452 ||||| ||||||||||| | |||| | |||||| |||||||| |||||||| | Sbjct 45932 GTGTGCAAACCTTCGTCTCTGCAGATCAATTCGTTAGAAAACGTCAAGCCCGGCATCAAA 45991 Query 138453 CCTTTGGTCTTGATGTAAAAGATGGCCGCGAAACTGCCCGaaaaaaaaaCGCCTTCGACA 138512 ||| | | || | | || || | || ||| |||||| || |||| |||||| ||| Sbjct 45992 CCTCTTTTTTTCAACCAGAAAATAGAAGCAAAAGAGCCCGAGAAGAAAATGCCTTCAACA 46051 Query 138513 ATAGCGAAAGCCACCA 138528 ||| || || |||| Sbjct 46052 GCAGCAAAGGCAACCA 46067 >seq1 Length=3127730 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 |||| || ||||||||||| || || || || | |||| || ||| || |||||| Sbjct 1885195 TGCAAAGTGGATTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAATTGT 1885136 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || || | ||||||| ||| || || || ||||| ||||| || |||||||| ||| Sbjct 1885135 TTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCCTTGTCTTGAATCTTT 1885076 Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 |||| || | || | ||||| || || || ||||| | ||| | || || || || Sbjct 1885075 GACTTGA-CGTTGTCAATAGTGTCAGAGGATTCAACTTCCAAAGTGATGGTCTTACCAGT 1885017 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 | || || || || |||||||| Sbjct 1885016 CAAGGTCTTAACGAAGATTTGCAT 1884993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002951398240