Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq1 109 1e-18 >seq1 Length=3127730 Score = 109 bits (120), Expect = 1e-18 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| ||||| | ||| | ||| ||||||||||| | ||||||||||| ||| || || || Sbjct 1884752 TCTAAGGACCAAGTGCAAAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 1884693 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||| | || || || || || || | | || || || || ||| ||||| Sbjct 1884692 ATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCCTT 1884633 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || ||||||||| ||| ||| || | ||||| | | ||| || ||||| ||||| Sbjct 1884632 GTCTTGAATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCAACTTCCAAAGTGAT 1884573 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || | || || ||||| ||||| Sbjct 1884572 GGTCTTACCAGTCAAGGTCTTAACAAAGATTTG 1884540 Score = 105 bits (116), Expect = 2e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| ||||| | ||| | ||| ||||||||||| | ||||||||||| ||| || || || Sbjct 1884980 TCTAAGGACCAAGTGCAAAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 1884921 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||| | || || || || || || | | || || || || ||| ||||| Sbjct 1884920 ATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCCTT 1884861 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || ||||||||| ||| ||| || | ||||| | | ||| || ||||| ||||| Sbjct 1884860 GTCTTGAATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCAACTTCCAAAGTGAT 1884801 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || | || || || || ||||| Sbjct 1884800 GGTCTTACCAGTCAAGGTCTTAACGAAGATTTG 1884768 Score = 100 bits (110), Expect = 7e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| ||||| | ||| | ||| || |||||||| | ||||||||||| ||| || || || Sbjct 1885208 TCTAAGGACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 1885149 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||| | || || || || || || | | || || || || ||| ||||| Sbjct 1885148 ATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCCTT 1885089 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || ||||||||| ||| ||| || | ||||| | | ||| || ||||| ||||| Sbjct 1885088 GTCTTGAATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCAACTTCCAAAGTGAT 1885029 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || | || || || || ||||| Sbjct 1885028 GGTCTTACCAGTCAAGGTCTTAACGAAGATTTG 1884996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178920935382948