Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq10 226 3e-54 seq5 143 3e-29 seq4 113 5e-20 >seq10 Length=744508 Score = 226 bits (250), Expect = 3e-54 Identities = 561/844 (66%), Gaps = 13/844 (2%) Strand=Plus/Plus Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663 |||||||| || || |||| || ||||| || |||||||| ||||||||||| Sbjct 45629 TTTTGATAATCAGAGACTCTTTTTTCGAAAAAGTTGGTTTTTCCGGCCAAGGAAATGTTT 45688 Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGC 132723 ||||||||| || || |||| |||||| |||| || || | |||| | | Sbjct 45689 TCCATAAAATCAAATGGATTGGTAACGTTGTAAACCTTGTTGTTACCCAAGGCGACCAAC 45748 Query 132724 AGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGA 132783 | |||||||| ||| || | |||||| |||| || ||| || | |||| || Sbjct 45749 AATCTGTCGGCGCAGAATTCCACGTATTGACACATCAATTTGCAGTTCATGCCCAACAAG 45808 Query 132784 CGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATT 132843 || |||| || ||||| | || || || ||| ||| || ||||||| |||| Sbjct 45809 GAAACTGGCAAGGCGTCGGTAAAGTAGTCTTTTTCAATGTTGACAGCTTCGGTGATGATT 45868 Query 132844 TCCCTAACGCGCGCCGCG-CTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAA 132902 | | || ||| | || | ||| | ||| || |||| |||||||||||| Sbjct 45869 TTCTCGACAATTTCCGGGTCTGGTTTGTT-CTGCAAGTGAGAAAACAACAAGCAAGCAAA 45927 Query 132903 GTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCAT 132962 |||| ||||| || ||||| ||| | || | |||||| || |||||||| ||||| Sbjct 45928 GTCGGTGTGCAAACCTTCGTCTCTGCAGATCAATTCGTTAGAAAACGTCAAGCCCGGCAT 45987 Query 132963 GAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTC 133022 | || | |||||| | ||| || || | || ||| |||||| ||||| | ||| || Sbjct 45988 CAAACCTCTTTTTTTCAACCAGAAAATAGAAGCAAAAGAGCCCGAGAAGAAAATGCCTTC 46047 Query 133023 GACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCG 133082 || || || || || |||| | || | ||| ||| | | | | |||||| | Sbjct 46048 AACAGCAGCAAAGGCAACCAATCTTTCAGCAAACAAGGCCTGGTCGTCGTTGATCCATCT 46107 Query 133083 CAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAAC--AAA 133140 || ||||| |||||||||| |||| || || || || ||||| || ||| ||| Sbjct 46108 CAAGGCCCAGTCGGCCTTTTGCTTGATTTGTGGAATTGTCTCAATGGCATTGAACAAAAA 46167 Query 133141 CGGAGTTTCTCTTCCGAGGAAC--GCACGTAGGTGTCGATGAGGGTCGAATACATTTCCG 133198 | || || ||| ||| | || || ||||| || | ||| || |||||| Sbjct 46168 CTCAGACTC-CTT---AGGGTCCTTGACATACGTGTCAATCAATAGCGAGTATGTTTCCG 46223 Query 133199 AGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCA 133258 | || | |||||||| ||| || || ||||| || || ||||| ||||| | Sbjct 46224 AATGGATATTCTCCATCATGATCTGGAACCCGTAGAAAAACTTGGCCTCTGGGACCTGAA 46283 Query 133259 CTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAA 133318 |||| || || ||| |||| || |||||||| || ||||| || || |||| Sbjct 46284 CTTCGGCAGAAAAGTTCTCCACCAAGTTCTCGTTGACAATTCCGTCCGACGCAGCAAAAA 46343 Query 133319 AGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG---CTCCCAGTCGC 133375 | |||| || | |||||| |||||||| || |||| || | ||||||| Sbjct 46344 ACGCCAAAACCCGAGAAATGAAAAACCGCTCGTTTTCCGTCAACCGGTTGTTCCAGTCGT 46403 Query 133376 GCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGT 133435 || |||||||||| || | ||||||| | ||||| |||||||| ||||| || |||| Sbjct 46404 GCAAATCCTTGGACAAATCAATCTCCTCGGCTGTCCAGAACGACGCTTCGGCCTTCTTGT 46463 Query 133436 ACAT 133439 |||| Sbjct 46464 ACAT 46467 >seq5 Length=1624186 Score = 143 bits (158), Expect = 3e-29 Identities = 394/595 (66%), Gaps = 13/595 (2%) Strand=Plus/Minus Query 132895 CAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAG 132954 || ||||| || ||||||||| ||||||||| ||| | ||||| || ||||| Sbjct 610405 CACGCAAAATCAGTATGCAAGCCTTCGTCCCTGCTAATCAACTCGTTAGAAAACGTCAAA 610346 Query 132955 CCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAG 133014 || |||||||| || | |||||| | |||||| || | || || || || || || Sbjct 610345 CCTGGCATGAGACCTCTTTTTTTCAACCAAAAGATTGAAGCAAACGATCCTGAGAAAAAT 610286 Query 133015 ACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCG 133074 | || || ||||| || || || || || || || | ||| || | | | | | Sbjct 610285 ATTCCTTCTACGGCAGCAAAGGCAACAAGACGTTCTGCAAACAAAGCGTTGTCGTCGTTG 610226 Query 133075 ATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTC 133134 ||||| || | ||||| || || || ||||||| || ||| || ||||||||||| || Sbjct 610225 ATCCAACGTAAAGCCCAGTCAGCTTTCTCTTTGATGCTCGGTATAGTTTCGATGGCATTG 610166 Query 133135 AACAAACGGAGTTT--CTC-TTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATAC 133191 ||||| | | | | ||| ||| || | | || || || || || ||||| Sbjct 610165 AACAA--GAATTCTGCCTCTTTCTGATCTTTG-ATATAAGTATCTATAAGTAAGGAATAG 610109 Query 133192 ATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACC 133251 | || || |||| ||| ||||| |||||||| || || ||||| |||||| | Sbjct 610108 GTCTCGGAATGTATGTTTTCCATCATTATTTGAAATCCATAGAAGCATTTTGCCTCGCTC 610049 Query 133252 ACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCG 133311 || ||||| ||| || || | || |||||||| ||||| |||||||| ||||| Sbjct 610048 ACTTGCACCTCTGTAGAAAAGTTTTGCACTAGATTTTCATTGACAATGCCGTCACTGGCA 609989 Query 133312 GCGAAAAAGGCCAGCAC-GTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGC----GCT 133366 || ||||| || | || || | ||||||| ||||| ||||| |||| | Sbjct 609988 GCAAAAAACGCTAAAACTCTGGAT-ATGAAATACCGCTCACCATCGTT-AAGCTTGTAAT 609931 Query 133367 CCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGG 133426 ||| || | || || | || | ||| ||| | ||||| || || ||||| | Sbjct 609930 TCCAATCATATATATCTTTTCCTAAATCAATCTCTTCGGCAGTCCAGAAAGATGCCTCTG 609871 Query 133427 CTTTTTTGTACATACTCCACATGTCCGAATATTGTATGGGAAAAATCACAAACCG 133481 | ||||| ||||| ||| || || || | || ||||||| |||||| || Sbjct 609870 CCTTTTTATACATCTGCCAAATCTCATGGTACTTGATAGGAAAAAGCACAAATCG 609816 >seq4 Length=1632271 Score = 113 bits (124), Expect = 5e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || |||||||| ||||| ||||| || || || |||||||| ||| | || || ||| || Sbjct 76710 AAGATGCAAATTTTCGTCAAAACCCTTACCGGTAAAACCATTACCTTGGAAGTGGAGTCC 76651 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | | | | | ||| || || | |||||||| || ||||| | ||| Sbjct 76650 TCGGACACCATTGACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATTCCACCAGAC 76591 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 ||||| | | || | || || || ||| |||| |||| | ||| | ||||||| Sbjct 76590 CAACAAAGATTGATCTTTGCTGGTAAGCAGTTGGAAGACGGCAGAACCTTGTCCGACTAC 76531 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||||| | || |||| ||||| || | |||||||| || Sbjct 76530 AACATCCAAAAGGAATCCACTTTGCACTTGGTCCTCAGATTGAGAGGTGG 76481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172524904960