Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03-
01] 44 sequences; 16,719,687 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq10 226 3e-54
seq5 143 3e-29
seq4 113 5e-20
>seq10
Length=744508
Score = 226 bits (250), Expect = 3e-54
Identities = 561/844 (66%), Gaps = 13/844 (2%)
Strand=Plus/Plus
Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663
|||||||| || || |||| || ||||| || |||||||| |||||||||||
Sbjct 45629 TTTTGATAATCAGAGACTCTTTTTTCGAAAAAGTTGGTTTTTCCGGCCAAGGAAATGTTT 45688
Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGC 132723
||||||||| || || |||| |||||| |||| || || | |||| | |
Sbjct 45689 TCCATAAAATCAAATGGATTGGTAACGTTGTAAACCTTGTTGTTACCCAAGGCGACCAAC 45748
Query 132724 AGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGA 132783
| |||||||| ||| || | |||||| |||| || ||| || | |||| ||
Sbjct 45749 AATCTGTCGGCGCAGAATTCCACGTATTGACACATCAATTTGCAGTTCATGCCCAACAAG 45808
Query 132784 CGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATT 132843
|| |||| || ||||| | || || || ||| ||| || ||||||| ||||
Sbjct 45809 GAAACTGGCAAGGCGTCGGTAAAGTAGTCTTTTTCAATGTTGACAGCTTCGGTGATGATT 45868
Query 132844 TCCCTAACGCGCGCCGCG-CTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAA 132902
| | || ||| | || | ||| | ||| || |||| ||||||||||||
Sbjct 45869 TTCTCGACAATTTCCGGGTCTGGTTTGTT-CTGCAAGTGAGAAAACAACAAGCAAGCAAA 45927
Query 132903 GTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCAT 132962
|||| ||||| || ||||| ||| | || | |||||| || |||||||| |||||
Sbjct 45928 GTCGGTGTGCAAACCTTCGTCTCTGCAGATCAATTCGTTAGAAAACGTCAAGCCCGGCAT 45987
Query 132963 GAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTC 133022
| || | |||||| | ||| || || | || ||| |||||| ||||| | ||| ||
Sbjct 45988 CAAACCTCTTTTTTTCAACCAGAAAATAGAAGCAAAAGAGCCCGAGAAGAAAATGCCTTC 46047
Query 133023 GACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCG 133082
|| || || || || |||| | || | ||| ||| | | | | |||||| |
Sbjct 46048 AACAGCAGCAAAGGCAACCAATCTTTCAGCAAACAAGGCCTGGTCGTCGTTGATCCATCT 46107
Query 133083 CAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAAC--AAA 133140
|| ||||| |||||||||| |||| || || || || ||||| || ||| |||
Sbjct 46108 CAAGGCCCAGTCGGCCTTTTGCTTGATTTGTGGAATTGTCTCAATGGCATTGAACAAAAA 46167
Query 133141 CGGAGTTTCTCTTCCGAGGAAC--GCACGTAGGTGTCGATGAGGGTCGAATACATTTCCG 133198
| || || ||| ||| | || || ||||| || | ||| || ||||||
Sbjct 46168 CTCAGACTC-CTT---AGGGTCCTTGACATACGTGTCAATCAATAGCGAGTATGTTTCCG 46223
Query 133199 AGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCA 133258
| || | |||||||| ||| || || ||||| || || ||||| ||||| |
Sbjct 46224 AATGGATATTCTCCATCATGATCTGGAACCCGTAGAAAAACTTGGCCTCTGGGACCTGAA 46283
Query 133259 CTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAA 133318
|||| || || ||| |||| || |||||||| || ||||| || || ||||
Sbjct 46284 CTTCGGCAGAAAAGTTCTCCACCAAGTTCTCGTTGACAATTCCGTCCGACGCAGCAAAAA 46343
Query 133319 AGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG---CTCCCAGTCGC 133375
| |||| || | |||||| |||||||| || |||| || | |||||||
Sbjct 46344 ACGCCAAAACCCGAGAAATGAAAAACCGCTCGTTTTCCGTCAACCGGTTGTTCCAGTCGT 46403
Query 133376 GCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGT 133435
|| |||||||||| || | ||||||| | ||||| |||||||| ||||| || ||||
Sbjct 46404 GCAAATCCTTGGACAAATCAATCTCCTCGGCTGTCCAGAACGACGCTTCGGCCTTCTTGT 46463
Query 133436 ACAT 133439
||||
Sbjct 46464 ACAT 46467
>seq5
Length=1624186
Score = 143 bits (158), Expect = 3e-29
Identities = 394/595 (66%), Gaps = 13/595 (2%)
Strand=Plus/Minus
Query 132895 CAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAG 132954
|| ||||| || ||||||||| ||||||||| ||| | ||||| || |||||
Sbjct 610405 CACGCAAAATCAGTATGCAAGCCTTCGTCCCTGCTAATCAACTCGTTAGAAAACGTCAAA 610346
Query 132955 CCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAG 133014
|| |||||||| || | |||||| | |||||| || | || || || || || ||
Sbjct 610345 CCTGGCATGAGACCTCTTTTTTTCAACCAAAAGATTGAAGCAAACGATCCTGAGAAAAAT 610286
Query 133015 ACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCG 133074
| || || ||||| || || || || || || || | ||| || | | | | |
Sbjct 610285 ATTCCTTCTACGGCAGCAAAGGCAACAAGACGTTCTGCAAACAAAGCGTTGTCGTCGTTG 610226
Query 133075 ATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTC 133134
||||| || | ||||| || || || ||||||| || ||| || ||||||||||| ||
Sbjct 610225 ATCCAACGTAAAGCCCAGTCAGCTTTCTCTTTGATGCTCGGTATAGTTTCGATGGCATTG 610166
Query 133135 AACAAACGGAGTTT--CTC-TTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATAC 133191
||||| | | | | ||| ||| || | | || || || || || |||||
Sbjct 610165 AACAA--GAATTCTGCCTCTTTCTGATCTTTG-ATATAAGTATCTATAAGTAAGGAATAG 610109
Query 133192 ATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACC 133251
| || || |||| ||| ||||| |||||||| || || ||||| |||||| |
Sbjct 610108 GTCTCGGAATGTATGTTTTCCATCATTATTTGAAATCCATAGAAGCATTTTGCCTCGCTC 610049
Query 133252 ACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCG 133311
|| ||||| ||| || || | || |||||||| ||||| |||||||| |||||
Sbjct 610048 ACTTGCACCTCTGTAGAAAAGTTTTGCACTAGATTTTCATTGACAATGCCGTCACTGGCA 609989
Query 133312 GCGAAAAAGGCCAGCAC-GTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGC----GCT 133366
|| ||||| || | || || | ||||||| ||||| ||||| |||| |
Sbjct 609988 GCAAAAAACGCTAAAACTCTGGAT-ATGAAATACCGCTCACCATCGTT-AAGCTTGTAAT 609931
Query 133367 CCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGG 133426
||| || | || || | || | ||| ||| | ||||| || || ||||| |
Sbjct 609930 TCCAATCATATATATCTTTTCCTAAATCAATCTCTTCGGCAGTCCAGAAAGATGCCTCTG 609871
Query 133427 CTTTTTTGTACATACTCCACATGTCCGAATATTGTATGGGAAAAATCACAAACCG 133481
| ||||| ||||| ||| || || || | || ||||||| |||||| ||
Sbjct 609870 CCTTTTTATACATCTGCCAAATCTCATGGTACTTGATAGGAAAAAGCACAAATCG 609816
>seq4
Length=1632271
Score = 113 bits (124), Expect = 5e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| |||||||| ||||| ||||| || || || |||||||| ||| | || || ||| ||
Sbjct 76710 AAGATGCAAATTTTCGTCAAAACCCTTACCGGTAAAACCATTACCTTGGAAGTGGAGTCC 76651
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
| |||| | | | | | ||| || || | |||||||| || ||||| | |||
Sbjct 76650 TCGGACACCATTGACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATTCCACCAGAC 76591
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
||||| | | || | || || || ||| |||| |||| | ||| | |||||||
Sbjct 76590 CAACAAAGATTGATCTTTGCTGGTAAGCAGTTGGAAGACGGCAGAACCTTGTCCGACTAC 76531
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||||||||||| | || |||| ||||| || | |||||||| ||
Sbjct 76530 AACATCCAAAAGGAATCCACTTTGCACTTGGTCCTCAGATTGAGAGGTGG 76481
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172524904960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |