Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq1 116 4e-21 >seq1 Length=3127730 Score = 116 bits (128), Expect = 4e-21 Identities = 167/233 (72%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 159548 TTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACA-GATATGT 159606 ||||||| || |||||||| || | || | ||||| | | ||||| | | || | Sbjct 1836071 TTATGATCACTTATCCATCCACTTACGGCTTGTTTGAGCCGGGCGTCAGAGATGCCAT-T 1836129 Query 159607 AAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAG 159666 | ||||| ||| || |||| || ||||| || | |||||||| ||| | ||||| ||| Sbjct 1836130 GACATTGTCCATAAGTATGGAGGCCAGGTGTACTTGGATGGTGCTAATATGAATGCCCAG 1836189 Query 159667 GTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAG 159726 || || | || || |||| |||||| ||||| || ||| | ||||||||||| Sbjct 1836190 GTTGGATTGACATCTCCTGGTGATCTTGGTGCTGATGTGTGCCATTTGAACTTACATAAA 1836249 Query 159727 ACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 ||||||| ||||| ||||| || || || ||||| || ||||| || |||| Sbjct 1836250 ACATTCTCCATTCCTCATGGTGGCGGTGGCCCTGGTGTTGGTCCAATCTGTGT 1836302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588050876571840