Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq5 309 3e-79 seq4 260 2e-64 seq10 208 9e-49 >seq5 Length=1624186 Score = 309 bits (342), Expect = 3e-79 Identities = 626/917 (68%), Gaps = 19/917 (2%) Strand=Plus/Minus Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729 |||||||| || | ||||||||| || || ||||| || ||||| | || || || | Sbjct 610696 TTTTGATAGTCTGAAACTCTTTTCTCGAAAAAATTCGTCTTTCCTGCCAAGGAGATGTTT 610637 Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789 ||||| |||||||| ||||| || || ||||||| ||| ||| ||||| || || Sbjct 610636 TCCATGAAATCAAAAGGATTGTTCACGTTATATACTTTATTGTTACCTAAGGATACTAAC 610577 Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849 | | || || ||||| | | |||| |||||| | | ||||||||||| || Sbjct 610576 AACCGGTCGGCAACAAACTCCACATATTGGTTCATTAAAGTGGCATTCATTCCTAACAAG 610517 Query 18850 TTAACAGGTAGTGCATC-TGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAAT 18908 |||| || || || | || | ||||| ||||||| || || || | || || Sbjct 610516 GATACAGAAAGAGCGTCATCGAAATATTTCTT-TTCTATAGCAACAGCTTCGGTGATGAT 610458 Query 18909 AGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAA 18968 | |||| | | || || || | | | ||| ||| | ||| ||||| Sbjct 610457 TTTTTCAACAATCTTTTTATCCAATTTGTTTTGCAAATGAGAGTACAATAGACACGCAAA 610398 Query 18969 ATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCAT 19028 |||| ||| | || ||||| || || ||||| || |||||||| || ||||| ||||| Sbjct 610397 ATCAGTATGCAAGCCTTCGTCCCTGCTAATCAACTCGTTAGAAAACGTCAAACCTGGCAT 610338 Query 19029 CAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTC 19088 || ||||||||||| ||||| || || |||||||| ||||| || || ||||| ||||| Sbjct 610337 GAGACCTCTTTTTTTCAACCAAAAGATTGAAGCAAACGATCCTGAGAAAAATATTCCTTC 610278 Query 19089 TACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTT 19148 ||| || ||||| ||||| || | |||| || | ||| | | | | ||||| Sbjct 610277 TACGGCAGCAAAGGCAACAAGACGTTCTGCAAACAAAGCGTTGTCGTCGTTGATCCAACG 610218 Query 19149 CAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAG--A 19206 | ||||| ||||| |||| ||| | | || || || || || | ||| || | | Sbjct 610217 TAAAGCCCAGTCAGCTTTCTCTTTGATGCTCGGTATAGTTTCGATGGCATTGAACAAGAA 610158 Query 19207 TACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAA 19266 | | | || |||| |||||| | ||| | |||||| | ||| || | || ||| Sbjct 610157 TTCTGCCTCTT-TCTG-ATCTTTGATATAAGTATCTATAAGTAAGGAATAGGTCTCGGAA 610100 Query 19267 TGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACT 19326 || || ||||| || || |||||||| || || ||| |||| || | | || || Sbjct 610099 TGTATGTTTTCCATCATTATTTGAAATCCATAGAAGCATTTTGCCTCGCTCACTTGCACC 610040 Query 19327 TCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAAT 19386 || || |||| ||| || | ||||||||| || || || ||||| || |||||||| Sbjct 610039 TCTGTAGAAAAGTTTTGCACTAGATTTTCATTGACAATGCCGTCACTGGCAGCAAAAAAC 609980 Query 19387 GCTAATACA-TGTTTAATAAAAT---GTTTTTCATCTGAGGTTAA---TGTA-TTCCAAT 19438 ||||| || || || | |||| | | |||| ||||| |||| ||||||| Sbjct 609979 GCTAAAACTCTGGATA-TGAAATACCGCTCACCATC----GTTAAGCTTGTAATTCCAAT 609925 Query 19439 CATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTT 19498 ||| |||||||| |||||| | ||||| | ||||| ||||| |||||||| |||| Sbjct 609924 CATATATATCTTTTCCTAAATCAATCTCTTCGGCAGTCCAGAAAGATGCCTCTGCCTTTT 609865 Query 19499 TATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTT 19558 ||||||| | ||| || ||| | || | |||||||| | ||||||| || |||| | Sbjct 609864 TATACATCTGCCAAATCTCATGGTACTTGATAGGAAAAAGCACAAATCGCTTGGTATTCT 609805 Query 19559 CTTTAAGAATAGGTTCC 19575 | ||||||| || ||| Sbjct 609804 CCTTAAGAAGTGGCTCC 609788 >seq4 Length=1632271 Score = 260 bits (288), Expect = 2e-64 Identities = 631/949 (66%), Gaps = 16/949 (2%) Strand=Plus/Minus Query 47895 TTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTCAGCACATAGATTACCA 47954 ||||| ||||| || ||||||| || ||||| | || ||| ||| | || Sbjct 1009303 TTACAAACAGCAGTTTCGTTTGGATCAGAATATTCAACAATCTCACAACACAAGTTGGAC 1009244 Query 47955 CATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGC 48014 ||||||| |||| | ||| | || ||| |||||| || |||||||| | | Sbjct 1009243 GATTTGATTATACCGAGATTCTTTTGGTTAGATTTAGCGTTACAGGCATCCTTGTATAAC 1009184 Query 48015 ATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCTAGCC 48074 || || || || || ||||| | |||| ||| | ||| || | ||| | | ||| Sbjct 1009183 ATGAATGGAGTACCGGTTTCAGTTTGAGCTTCCAAGATGGAATACCACAACTTTTGAGCT 1009124 Query 48075 TTTATAACAGCTCTA--GCT-TTATTATCATGTTCGTATTTAGTATATAACTTCTCAAAT 48131 || ||| | ||| ||| ||| ||| |||||||||| ||| || ||||| Sbjct 1009123 TT---AACTGTTCTTCTGCTCTTACCTTCACGTTCGTATTTTTCATACAAAGCTTCAAAC 1009067 Query 48132 TCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGACCAATCC 48191 || || ||||| | | | || || || ||| || ||| | | | ||||||||| Sbjct 1009066 TCCTCACCATAAGTGTCAGCCAAACCTGGGACTTCGTTTGGAGAGAATAGGGACCAATCC 1009007 Query 48192 TCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCC 48251 | | || | || || ||||||| | ||| | ||||| | ||| ||| || || Sbjct 1009006 TGGTTTTTCTCAACCCTCTTCATAAACAAATCGGAAATCCACAAGGCTGGAAACAAGTCT 1008947 Query 48252 CTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCA 48311 |||| ||| | |||||| || || ||| || | | |||| ||| || | ||||| Sbjct 1008946 CTAGCTCTGATTTCTTCTTTACCGTGATTTTTTCTGATATCAATAAAATCAAAGATATCT 1008887 Query 48312 GCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCT 48371 | ||||||||| || | ||| || || | |||| |||| ||| ||||| |||||||| Sbjct 1008886 GAATGCCATGGCTCAACATAGATAGCGAAAGCACCAGGTCTTTTGTTACCACCTTGATCA 1008827 Query 48372 ATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCA 48431 | |||||| ||||||||||| ||||||| |||||||| | ||||| || || |||| Sbjct 1008826 ACATATCTAGCAGTATTGTTGAAAACTCTCAACATTGGAATGATACCGTTGGAAGTACCG 1008767 Query 48432 TTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAAT-TGAAATACCTATACC 48490 ||||| || | || || ||| | ||||| ||||| | || || || ||| ||||| Sbjct 1008766 TTGGTACCAGCTATGTACGACCCAGTGGCTCTGATATTGTTGATGTGCAA-ACCAATACC 1008708 Query 48491 ACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACT 48550 ||| || ||| || | || |||| | || ||| |||| || || || Sbjct 1008707 ACCAGCATGCTTACTGATGATGGCCATTTGTTTCAATGTTTCAAAAATGCCGTCAATGGA 1008648 Query 48551 ATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATT 48610 |||| | |||| | || |||||| ||||| || | | ||| || | ||| Sbjct 1008647 GTCATTTTTCATGGCAACAAGGAAACAAGATGACATCTGGGCGTTTGGAGTACCAGCATT 1008588 Query 48611 AAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAAT 48670 || || || ||||| ||||| | || |||| || | ||| || || |||||||| Sbjct 1008587 GAACAAAGTAGGAGAAGCATGGGTGAAATATTTGAGAGACATCAAGTTGTAAGTTTCAAT 1008528 Query 48671 AAC----AGAATCTATATCCCATTGATGTATACCTATAGATACACGCATTAACATATATT 48726 ||| |||| | | || | ||| ||||| |||| || | ||| | || || || Sbjct 1008527 AACTTTTGGAATGTCT-TCAC---CATGAATACCAATAGCCACTCTCATAATCAAATGTT 1008472 Query 48727 GAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAA 48786 ||||||||||| |||||||| ||| ||| |||| | || ||| ||||||| || || | Sbjct 1008471 GAGGTCTTTCAGCAATTTTGCCATTAATTCTCAACAAGTAAGATCTTTCCAAAGTCTTGA 1008412 Query 48787 AACCAAAATAGTTGTATGAAAAGTCGTTATCATTAATAATTGATGAATT 48835 ||||||| |||||||| |||||| | |||| | |||| ||||| Sbjct 1008411 AACCAAAGTAGTTGTAGTTAAAGTCTCTGTCATAGACTATTGCGGAATT 1008363 >seq10 Length=744508 Score = 208 bits (230), Expect = 9e-49 Identities = 579/886 (65%), Gaps = 13/886 (1%) Strand=Plus/Plus Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729 |||||||| || | ||||||||||| || || || |||||||| | || || || | Sbjct 45629 TTTTGATAATCAGAGACTCTTTTTTCGAAAAAGTTGGTTTTTCCGGCCAAGGAAATGTTT 45688 Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789 |||||||||||||||||||| | || || || | || ||| || || | | | Sbjct 45689 TCCATAAAATCAAATGGATTGGTAACGTTGTAAACCTTGTTGTTACCCAAGGCGACCAAC 45748 Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849 | ||| || || |||| | ||| ||||| | || ||||| || | || Sbjct 45749 AATCTGTCGGCGCAGAATTCCACGTATTGACACATCAATTTGCAGTTCATGCCCAACAAG 45808 Query 18850 TTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAATA 18909 ||| || | || || |||| | |||| ||| || || || || || | || || Sbjct 45809 GAAACTGGCAAGGCGTCGGTAAAGTAGTCTTTTTCAATGTTGACAGCTTCGGTGATGATT 45868 Query 18910 GATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAAA 18969 | || | || | || || | | || ||||| ||| || ||||| Sbjct 45869 TTCTCGACAATTTCCGGGTCTGGTTTGTTCTGCAAGTGAGAAAACAACAAGCAAGCAAAG 45928 Query 18970 TCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATC 19029 || || | || |||||||| | |||||||| |||||||| || || || |||||| Sbjct 45929 TCGGTGTGCAAACCTTCGTCTCTGCAGATCAATTCGTTAGAAAACGTCAAGCCCGGCATC 45988 Query 19030 AGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCT 19089 | ||||||||||| |||||||| ||||||||||| || || || ||||| || ||||| Sbjct 45989 AAACCTCTTTTTTTCAACCAGAAAATAGAAGCAAAAGAGCCCGAGAAGAAAATGCCTTCA 46048 Query 19090 ACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTA-GCATCATTATTATGAATCCATTT 19148 || || ||||| ||||| | |||||| || ||| | || | | | | |||||| | Sbjct 46049 ACAGCAGCAAAGGCAACCAATCTTTCAGCA-AACAAGGCCTGGTCGTCGTTGATCCATCT 46107 Query 19149 CAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATA 19208 || ||||| || ||||| | || | ||| |||||||| || | ||| || | | | Sbjct 46108 CAAGGCCCAGTCGGCCTTTTGCTTGATTTGTGGAATTGTCTCAATGGCATTGAACAAAAA 46167 Query 19209 CATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATG 19268 | | ||| | | || || ||||| | || ||||||| ||| |||| ||||| Sbjct 46168 CTCAGACTCCTTAGGGTCCTTGACATACGTGTCAATCAATAGCGAGTATGTTTCCGAATG 46227 Query 19269 AATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTC 19328 ||||| || || ||||| || ||||| ||| | | || |||| | ||| ||||| Sbjct 46228 GATATTCTCCATCATGATCTGGAACCCGTAGAAAAACTTGGCCTCTGGGACCTGAACTTC 46287 Query 19329 ACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGC 19388 | |||| | || ||||| || || || || ||||| || || |||||||| || Sbjct 46288 GGCAGAAAAGTTCTCCACCAAGTTCTCGTTGACAATTCCGTCCGACGCAGCAAAAAACGC 46347 Query 19389 TAATACATGTTTAATAAAA-------TGTTTTTCATCTGAGGTTAATGTATTCCAATCAT 19441 || || | ||| ||| ||||| | || | | | ||||| || | Sbjct 46348 CAAAACCCGAGAAATGAAAAACCGCTCGTTTTCCGTCAACCGGT----TGTTCCAGTCGT 46403 Query 19442 TAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTAT 19501 | ||| || || ||||| | || || ||||||| || || || || || || || | Sbjct 46404 GCAAATCCTTGGACAAATCAATCTCCTCGGCTGTCCAGAACGACGCTTCGGCCTTCTTGT 46463 Query 19502 ACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCT 19547 |||| | ||| || ||| | || | ||||| | | |||||||| Sbjct 46464 ACATCTGCCAAATCTCATGGTACTTGATAGGCATCAACACAAATCT 46509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108490840160