Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03-
01] 44 sequences; 16,719,687 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq5 309 3e-79
seq4 260 2e-64
seq10 208 9e-49
>seq5
Length=1624186
Score = 309 bits (342), Expect = 3e-79
Identities = 626/917 (68%), Gaps = 19/917 (2%)
Strand=Plus/Minus
Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729
|||||||| || | ||||||||| || || ||||| || ||||| | || || || |
Sbjct 610696 TTTTGATAGTCTGAAACTCTTTTCTCGAAAAAATTCGTCTTTCCTGCCAAGGAGATGTTT 610637
Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789
||||| |||||||| ||||| || || ||||||| ||| ||| ||||| || ||
Sbjct 610636 TCCATGAAATCAAAAGGATTGTTCACGTTATATACTTTATTGTTACCTAAGGATACTAAC 610577
Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849
| | || || ||||| | | |||| |||||| | | ||||||||||| ||
Sbjct 610576 AACCGGTCGGCAACAAACTCCACATATTGGTTCATTAAAGTGGCATTCATTCCTAACAAG 610517
Query 18850 TTAACAGGTAGTGCATC-TGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAAT 18908
|||| || || || | || | ||||| ||||||| || || || | || ||
Sbjct 610516 GATACAGAAAGAGCGTCATCGAAATATTTCTT-TTCTATAGCAACAGCTTCGGTGATGAT 610458
Query 18909 AGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAA 18968
| |||| | | || || || | | | ||| ||| | ||| |||||
Sbjct 610457 TTTTTCAACAATCTTTTTATCCAATTTGTTTTGCAAATGAGAGTACAATAGACACGCAAA 610398
Query 18969 ATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCAT 19028
|||| ||| | || ||||| || || ||||| || |||||||| || ||||| |||||
Sbjct 610397 ATCAGTATGCAAGCCTTCGTCCCTGCTAATCAACTCGTTAGAAAACGTCAAACCTGGCAT 610338
Query 19029 CAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTC 19088
|| ||||||||||| ||||| || || |||||||| ||||| || || ||||| |||||
Sbjct 610337 GAGACCTCTTTTTTTCAACCAAAAGATTGAAGCAAACGATCCTGAGAAAAATATTCCTTC 610278
Query 19089 TACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTT 19148
||| || ||||| ||||| || | |||| || | ||| | | | | |||||
Sbjct 610277 TACGGCAGCAAAGGCAACAAGACGTTCTGCAAACAAAGCGTTGTCGTCGTTGATCCAACG 610218
Query 19149 CAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAG--A 19206
| ||||| ||||| |||| ||| | | || || || || || | ||| || | |
Sbjct 610217 TAAAGCCCAGTCAGCTTTCTCTTTGATGCTCGGTATAGTTTCGATGGCATTGAACAAGAA 610158
Query 19207 TACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAA 19266
| | | || |||| |||||| | ||| | |||||| | ||| || | || |||
Sbjct 610157 TTCTGCCTCTT-TCTG-ATCTTTGATATAAGTATCTATAAGTAAGGAATAGGTCTCGGAA 610100
Query 19267 TGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACT 19326
|| || ||||| || || |||||||| || || ||| |||| || | | || ||
Sbjct 610099 TGTATGTTTTCCATCATTATTTGAAATCCATAGAAGCATTTTGCCTCGCTCACTTGCACC 610040
Query 19327 TCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAAT 19386
|| || |||| ||| || | ||||||||| || || || ||||| || ||||||||
Sbjct 610039 TCTGTAGAAAAGTTTTGCACTAGATTTTCATTGACAATGCCGTCACTGGCAGCAAAAAAC 609980
Query 19387 GCTAATACA-TGTTTAATAAAAT---GTTTTTCATCTGAGGTTAA---TGTA-TTCCAAT 19438
||||| || || || | |||| | | |||| ||||| |||| |||||||
Sbjct 609979 GCTAAAACTCTGGATA-TGAAATACCGCTCACCATC----GTTAAGCTTGTAATTCCAAT 609925
Query 19439 CATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTT 19498
||| |||||||| |||||| | ||||| | ||||| ||||| |||||||| ||||
Sbjct 609924 CATATATATCTTTTCCTAAATCAATCTCTTCGGCAGTCCAGAAAGATGCCTCTGCCTTTT 609865
Query 19499 TATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTT 19558
||||||| | ||| || ||| | || | |||||||| | ||||||| || |||| |
Sbjct 609864 TATACATCTGCCAAATCTCATGGTACTTGATAGGAAAAAGCACAAATCGCTTGGTATTCT 609805
Query 19559 CTTTAAGAATAGGTTCC 19575
| ||||||| || |||
Sbjct 609804 CCTTAAGAAGTGGCTCC 609788
>seq4
Length=1632271
Score = 260 bits (288), Expect = 2e-64
Identities = 631/949 (66%), Gaps = 16/949 (2%)
Strand=Plus/Minus
Query 47895 TTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTCAGCACATAGATTACCA 47954
||||| ||||| || ||||||| || ||||| | || ||| ||| | ||
Sbjct 1009303 TTACAAACAGCAGTTTCGTTTGGATCAGAATATTCAACAATCTCACAACACAAGTTGGAC 1009244
Query 47955 CATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGC 48014
||||||| |||| | ||| | || ||| |||||| || |||||||| | |
Sbjct 1009243 GATTTGATTATACCGAGATTCTTTTGGTTAGATTTAGCGTTACAGGCATCCTTGTATAAC 1009184
Query 48015 ATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCTAGCC 48074
|| || || || || ||||| | |||| ||| | ||| || | ||| | | |||
Sbjct 1009183 ATGAATGGAGTACCGGTTTCAGTTTGAGCTTCCAAGATGGAATACCACAACTTTTGAGCT 1009124
Query 48075 TTTATAACAGCTCTA--GCT-TTATTATCATGTTCGTATTTAGTATATAACTTCTCAAAT 48131
|| ||| | ||| ||| ||| ||| |||||||||| ||| || |||||
Sbjct 1009123 TT---AACTGTTCTTCTGCTCTTACCTTCACGTTCGTATTTTTCATACAAAGCTTCAAAC 1009067
Query 48132 TCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGACCAATCC 48191
|| || ||||| | | | || || || ||| || ||| | | | |||||||||
Sbjct 1009066 TCCTCACCATAAGTGTCAGCCAAACCTGGGACTTCGTTTGGAGAGAATAGGGACCAATCC 1009007
Query 48192 TCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCC 48251
| | || | || || ||||||| | ||| | ||||| | ||| ||| || ||
Sbjct 1009006 TGGTTTTTCTCAACCCTCTTCATAAACAAATCGGAAATCCACAAGGCTGGAAACAAGTCT 1008947
Query 48252 CTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCA 48311
|||| ||| | |||||| || || ||| || | | |||| ||| || | |||||
Sbjct 1008946 CTAGCTCTGATTTCTTCTTTACCGTGATTTTTTCTGATATCAATAAAATCAAAGATATCT 1008887
Query 48312 GCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCT 48371
| ||||||||| || | ||| || || | |||| |||| ||| ||||| ||||||||
Sbjct 1008886 GAATGCCATGGCTCAACATAGATAGCGAAAGCACCAGGTCTTTTGTTACCACCTTGATCA 1008827
Query 48372 ATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCA 48431
| |||||| ||||||||||| ||||||| |||||||| | ||||| || || ||||
Sbjct 1008826 ACATATCTAGCAGTATTGTTGAAAACTCTCAACATTGGAATGATACCGTTGGAAGTACCG 1008767
Query 48432 TTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAAT-TGAAATACCTATACC 48490
||||| || | || || ||| | ||||| ||||| | || || || ||| |||||
Sbjct 1008766 TTGGTACCAGCTATGTACGACCCAGTGGCTCTGATATTGTTGATGTGCAA-ACCAATACC 1008708
Query 48491 ACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACT 48550
||| || ||| || | || |||| | || ||| |||| || || ||
Sbjct 1008707 ACCAGCATGCTTACTGATGATGGCCATTTGTTTCAATGTTTCAAAAATGCCGTCAATGGA 1008648
Query 48551 ATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATT 48610
|||| | |||| | || |||||| ||||| || | | ||| || | |||
Sbjct 1008647 GTCATTTTTCATGGCAACAAGGAAACAAGATGACATCTGGGCGTTTGGAGTACCAGCATT 1008588
Query 48611 AAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAAT 48670
|| || || ||||| ||||| | || |||| || | ||| || || ||||||||
Sbjct 1008587 GAACAAAGTAGGAGAAGCATGGGTGAAATATTTGAGAGACATCAAGTTGTAAGTTTCAAT 1008528
Query 48671 AAC----AGAATCTATATCCCATTGATGTATACCTATAGATACACGCATTAACATATATT 48726
||| |||| | | || | ||| ||||| |||| || | ||| | || || ||
Sbjct 1008527 AACTTTTGGAATGTCT-TCAC---CATGAATACCAATAGCCACTCTCATAATCAAATGTT 1008472
Query 48727 GAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAA 48786
||||||||||| |||||||| ||| ||| |||| | || ||| ||||||| || || |
Sbjct 1008471 GAGGTCTTTCAGCAATTTTGCCATTAATTCTCAACAAGTAAGATCTTTCCAAAGTCTTGA 1008412
Query 48787 AACCAAAATAGTTGTATGAAAAGTCGTTATCATTAATAATTGATGAATT 48835
||||||| |||||||| |||||| | |||| | |||| |||||
Sbjct 1008411 AACCAAAGTAGTTGTAGTTAAAGTCTCTGTCATAGACTATTGCGGAATT 1008363
>seq10
Length=744508
Score = 208 bits (230), Expect = 9e-49
Identities = 579/886 (65%), Gaps = 13/886 (1%)
Strand=Plus/Plus
Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729
|||||||| || | ||||||||||| || || || |||||||| | || || || |
Sbjct 45629 TTTTGATAATCAGAGACTCTTTTTTCGAAAAAGTTGGTTTTTCCGGCCAAGGAAATGTTT 45688
Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789
|||||||||||||||||||| | || || || | || ||| || || | | |
Sbjct 45689 TCCATAAAATCAAATGGATTGGTAACGTTGTAAACCTTGTTGTTACCCAAGGCGACCAAC 45748
Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849
| ||| || || |||| | ||| ||||| | || ||||| || | ||
Sbjct 45749 AATCTGTCGGCGCAGAATTCCACGTATTGACACATCAATTTGCAGTTCATGCCCAACAAG 45808
Query 18850 TTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAATA 18909
||| || | || || |||| | |||| ||| || || || || || | || ||
Sbjct 45809 GAAACTGGCAAGGCGTCGGTAAAGTAGTCTTTTTCAATGTTGACAGCTTCGGTGATGATT 45868
Query 18910 GATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAAA 18969
| || | || | || || | | || ||||| ||| || |||||
Sbjct 45869 TTCTCGACAATTTCCGGGTCTGGTTTGTTCTGCAAGTGAGAAAACAACAAGCAAGCAAAG 45928
Query 18970 TCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATC 19029
|| || | || |||||||| | |||||||| |||||||| || || || ||||||
Sbjct 45929 TCGGTGTGCAAACCTTCGTCTCTGCAGATCAATTCGTTAGAAAACGTCAAGCCCGGCATC 45988
Query 19030 AGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCT 19089
| ||||||||||| |||||||| ||||||||||| || || || ||||| || |||||
Sbjct 45989 AAACCTCTTTTTTTCAACCAGAAAATAGAAGCAAAAGAGCCCGAGAAGAAAATGCCTTCA 46048
Query 19090 ACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTA-GCATCATTATTATGAATCCATTT 19148
|| || ||||| ||||| | |||||| || ||| | || | | | | |||||| |
Sbjct 46049 ACAGCAGCAAAGGCAACCAATCTTTCAGCA-AACAAGGCCTGGTCGTCGTTGATCCATCT 46107
Query 19149 CAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATA 19208
|| ||||| || ||||| | || | ||| |||||||| || | ||| || | | |
Sbjct 46108 CAAGGCCCAGTCGGCCTTTTGCTTGATTTGTGGAATTGTCTCAATGGCATTGAACAAAAA 46167
Query 19209 CATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATG 19268
| | ||| | | || || ||||| | || ||||||| ||| |||| |||||
Sbjct 46168 CTCAGACTCCTTAGGGTCCTTGACATACGTGTCAATCAATAGCGAGTATGTTTCCGAATG 46227
Query 19269 AATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTC 19328
||||| || || ||||| || ||||| ||| | | || |||| | ||| |||||
Sbjct 46228 GATATTCTCCATCATGATCTGGAACCCGTAGAAAAACTTGGCCTCTGGGACCTGAACTTC 46287
Query 19329 ACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGC 19388
| |||| | || ||||| || || || || ||||| || || |||||||| ||
Sbjct 46288 GGCAGAAAAGTTCTCCACCAAGTTCTCGTTGACAATTCCGTCCGACGCAGCAAAAAACGC 46347
Query 19389 TAATACATGTTTAATAAAA-------TGTTTTTCATCTGAGGTTAATGTATTCCAATCAT 19441
|| || | ||| ||| ||||| | || | | | ||||| || |
Sbjct 46348 CAAAACCCGAGAAATGAAAAACCGCTCGTTTTCCGTCAACCGGT----TGTTCCAGTCGT 46403
Query 19442 TAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTAT 19501
| ||| || || ||||| | || || ||||||| || || || || || || || |
Sbjct 46404 GCAAATCCTTGGACAAATCAATCTCCTCGGCTGTCCAGAACGACGCTTCGGCCTTCTTGT 46463
Query 19502 ACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCT 19547
|||| | ||| || ||| | || | ||||| | | ||||||||
Sbjct 46464 ACATCTGCCAAATCTCATGGTACTTGATAGGCATCAACACAAATCT 46509
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562108490840160
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