Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 1e-12 >seq1 Length=3127730 Score = 87.8 bits (96), Expect = 1e-12 Identities = 388/605 (64%), Gaps = 31/605 (5%) Strand=Plus/Minus Query 29808 TTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTC 29867 ||| | ||| ||| ||| ||||| ||||| |||| |||||| | ||||| || || Sbjct 2169214 TTCAATGTGGTCCTTGTACACGTGGGCGTCACCCATGGTGTGTATGAACTCACCACAGTC 2169155 Query 29868 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 29927 | | || || || ||||| | || || |||| || || || || || || Sbjct 2169154 CATGTCACACACCTGGGCAATCATCTTGGTTAGAAGAGCATACGACGCAATATTGAAAGG 2169095 Query 29928 TACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCT-----CT-CC 29981 || || | ||||| || | || |||||||| || |||||||||||| || || Sbjct 2169094 AACACCCAAGCCCATATCGCAAGATCTCTGGTATAGGAGACACGAGAGCTGAGGTCTGCC 2169035 Query 29982 GTC---------GCTCACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATG-- 30030 || | | || || ||||||| | ||||| |||||||| ||||| Sbjct 2169034 ATCTTTAGGAAAGTTTACATAGAACTGACTAAACACATGGCAAGGAGGAAGCGCCATCTT 2168975 Query 30031 AGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTC 30090 ||| || ||| |||||||| || ||| |||||| | || || | |||||| || Sbjct 2168974 AGGG--AAATCTGGTGGGTTCCAAGCAGACATGATGATTCTTCTATCGTACGGGTTGGTC 2168917 Query 30091 CTGA---TGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCC 30147 | | | || || | | | |||||||| || || ||||| || Sbjct 2168916 TTCAATTTATGGATAACCTCCGCT---AATTGATCCACGCCTTGGCCATTATAGTCGGCA 2168860 Query 30148 CTCATG-TCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAG 30206 ||| | | |||| |||||||| ||||| |||||||||||||| || || || || | Sbjct 2168859 -TCACAATTCTTGTATTCTGCTCCAAAATGTCTCCACTGGAACCCATAAACAGGACCTAA 2168801 Query 30207 GTCTCC--CTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTG 30264 || || |||| || || || || || | |||| | | | |||||| || || Sbjct 2168800 ATCGCCCTCTCTATTCTTTG-TC-AACCCAATACTGTCTAGATACTCTCTGCTTCCATTT 2168743 Query 30265 GCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACG 30324 | ||||||||||| || |||| || || |||| ||| || ||| | || | | Sbjct 2168742 CCTTCCCAGATCTTAACGCCCTGTTCCGAAAGCTTCTTGCCGTCAGTGCAGCCCTTAATA 2168683 Query 30325 AACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGA 30384 ||||| || |||||| | | | |||| |||| ||| ||||||| || | | ||| Sbjct 2168682 AACCAAAGAAGCTCCAAGATAATGCCCTTGGAAAATACCTTCTTGGTGGTCAACAAAGGA 2168623 Query 30385 AACTG 30389 ||||| Sbjct 2168622 AACTG 2168618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408617380878812