Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq10 118 2e-21 seq5 105 1e-17 >seq10 Length=744508 Score = 118 bits (130), Expect = 2e-21 Identities = 375/574 (65%), Gaps = 23/574 (4%) Strand=Plus/Minus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || || ||| |||||||||||||||| || || |||||| ||||| ||||||||| Sbjct 46479 GAGATTTGGCAGATGTACAAGAAGGCCGAAGCGTCGTTCTGGACAGCCGAGGAGATTGAT 46420 Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTC---TATCCAAAGACGAGCAGCATTT--TC 25588 || ||||||| || ||| |||| || | | | || |||||| | ||| | Sbjct 46419 TTGTCCAAGGATTTGCACGACTGGAACAACCGGTTGACGGAAAACGAGCGGTTTTTCATT 46360 Query 25589 TCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCG 25648 || | || ||||| || ||||| || || || || || || |||||||| || | Sbjct 46359 TCTCG--GGTTTTGGCGTTTTTTGCTGCGTCGGACGGAATTGTCAACGAGAACTTGGTGG 46302 Query 25649 AGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGG 25708 ||| || | ||||| ||| | |||||||||| ||||||||| |||||||| Sbjct 46301 AGAACTTTTCTGCCGAAGTTCAGGTCCCAGAGGCCAAGTTTTTCTACGGGTTCCAGATCA 46242 Query 25709 CCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTACAG 25765 || || ||| | || || || || | ||| |||| ||||| | | | Sbjct 46241 TGATGGAGAATATCCATTCGGAAACATA---CTCGCTATTGATTGACACGTATGTCAAGG 46185 Query 25766 ACGTCGCCGAGAGAGATCGGCTGTTTG----GTGCCATCGAGCACATACCCAGCATCAAG 25821 || || | ||| | | |||| |||||| ||| || || |||||| Sbjct 46184 AC----CCTAAGGAGTCTGAGTTTTTGTTCAATGCCATTGAGACAATTCCACAAATCAAG 46129 Query 25822 AGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGG 25881 ||||| |||||| ||| ||||||||| | | || ||||| || | Sbjct 46128 CAAAAGGCCGACTGGGCCTTGAGATGGATCAACGACGACCAGGCCTTGTTTGCTGAAAGA 46069 Query 25882 CTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTC 25941 |||| |||||||||||||| || ||||| || ||| || || ||||| | || ||| Sbjct 46068 TTGGTTGCCTTTGCTGCTGTTGAAGGCATTTTCTTCTCGGGCTCTTTTGCTTCTATTTTC 46009 Query 25942 TGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTAC-TTTTCCAACGAGCTCATCAGCAG 26000 ||| | || | | || ||| ||||||| || ||||| ||||| | ||| |||| Sbjct 46008 TGGTTGAAAAAAAGAGGTTTGATG-CCGGGCTTGACGTTTTCTAACGAATTGATCTGCAG 45950 Query 26001 GGACGAGGGTCTCCACAGAGATTTTGCCTGCCTG 26034 ||||| ||| | |||| || ||||| ||| || Sbjct 45949 AGACGAAGGTTTGCACACCGACTTTGCTTGCTTG 45916 >seq5 Length=1624186 Score = 105 bits (116), Expect = 1e-17 Identities = 375/571 (66%), Gaps = 19/571 (3%) Strand=Plus/Plus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || || ||| ||||||| || ||||| | || |||||| ||||||||||||||| Sbjct 609846 GAGATTTGGCAGATGTATAAAAAGGCAGAGGCATCTTTCTGGACTGCCGAAGAGATTGAT 609905 Query 25534 CTGGCCAAGGACATGGACGGCTGG---TACGCTCTATCCAAAGACGAGCAGCATTT--TC 25588 | | || || || | | ||| ||| || | | | |||| | |||| | Sbjct 609906 TTAGGAAAAGATATATATGATTGGAATTACAAGCTTAACGATGGTGAGCGGTATTTCATA 609965 Query 25589 TCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCT-GTGC 25647 || || || || || || ||||| ||| ||| || || || || || ||||| |||| Sbjct 609966 TCCAGA--GTTTTAGCGTTTTTTGCTGCCAGTGACGGCATTGTCAATGAAAATCTAGTGC 610023 Query 25648 GAGAGATTCACCAGGGAAGTGCA-GTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 | | || | | || ||||| || | | |||| || || ||||| || || || || Sbjct 610024 AAAACTTTT-CTACAGAGGTGCAAGTGAGCG-AGGCAAAATGCTTCTATGGATTTCAAAT 610081 Query 25707 GGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCT-GATGACGTACATTACAG 25765 || ||||| | || || ||| ||| || ||| | ||| || || || | || Sbjct 610082 AATGATGGAAAACATACATTCCGAGACCTATTCCTTACTTATAGAT-ACTTATATCAAAG 610140 Query 25766 ACGTCGCCGAGAG--AGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAG 25823 | || |||| ||| |||| ||||||||| ||||| |||||||| Sbjct 610141 A--TCAGAAAGAGGCAGAATTCTTGTTCAATGCCATCGAAACTATACCGAGCATCAAAGA 610198 Query 25824 GAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCT 25883 ||| || ||||| | ||||||||| | | | |||| ||||| || || || Sbjct 610199 GAAAGCTGACTGGGCTTTACGTTGGATCAACGACGACAACGCTTTGTTTGCAGAACGTCT 610258 Query 25884 GGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTG 25943 || ||||||||||| || || || || |||||| || |||||||| | ||||| || Sbjct 610259 TGTTGCCTTTGCTGCCGTAGAAGGAATATTTTTCTCAGGATCGTTTGCTTCAATCTTTTG 610318 Query 25944 GCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGG 26002 | | || | ||| || | |||||| || || ||||| |||||| | || ||||||| Sbjct 610319 GTTGAA-AAAAAGAGGTCTCATGCCAGGTTTGACGTTTTCTAACGAGTTGATTAGCAGGG 610377 Query 26003 ACGAGGGTCTCCACAGAGATTTTGCCTGCCT 26033 |||| || | || | |||||||| || || Sbjct 610378 ACGAAGGCTTGCATACTGATTTTGCGTGTCT 610408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844289135360