Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03-
01] 44 sequences; 16,719,687 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq4 105 6e-18
seq1 105 6e-18
>seq4
Length=1632271
Score = 105 bits (116), Expect = 6e-18
Identities = 163/233 (70%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 28548 GTAAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAA 28607
|| || |||||||| || || ||||| | || ||||||||||||||| ||| |||
Sbjct 76713 GTCAAGATGCAAATTTTCGTCAAAACCCTTACCGGTAAAACCATTACCTTGGAAGTGGAG 76654
Query 28608 CCTTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTA 28667
| || || || | | | || |||| || || |||||||| || | || |
Sbjct 76653 TCCTCGGACACCATTGACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATTCCACCA 76594
Query 28668 GATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGAT 28727
|| ||||| ||| | |||||||| || || || |||||||| | ||| || ||||
Sbjct 76593 GACCAACAAAGATTGATCTTTGCTGGTAAGCAGTTGGAAGACGGCAGAACCTTGTCCGAC 76534
Query 28728 TATAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780
|| ||||| ||||| ||||| ||| ||||| |||| | ||||| |||| ||
Sbjct 76533 TACAACATCCAAAAGGAATCCACTTTGCACTTGGTCCTCAGATTGAGAGGTGG 76481
>seq1
Length=3127730
Score = 105 bits (116), Expect = 6e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612
||||||||| ||||| || || || || ||||| ||||| || ||| ||| | ||
Sbjct 1884536 AATGCAAATCTTTGTTAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCCTC 1884595
Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672
|| || | | | | ||||| ||| || ||||| || || | || ||||||
Sbjct 1884596 TGACACTATTGACAACGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCAGATCA 1884655
Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732
||| ||| | || ||||| || |||||||| |||||| || ||| || | || || ||
Sbjct 1884656 ACAAAGATTGATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACCTTGTCTGACTACAA 1884715
Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
||||||||| || || ||| ||||| |||| | ||||| |||| || ||
Sbjct 1884716 CATTCAAAAGGAGTCCACTTTGCACTTGGTCCTTAGATTGAGAGGTGGTAT 1884766
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
|||||||| || || || || || || ||||| ||||| || ||| ||| | ||
Sbjct 1884993 ATGCAAATCTTCGTTAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCCTCT 1885052
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | | | ||||| ||| || ||||| || || | || |||||||
Sbjct 1885053 GACACTATTGACAACGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCAGATCAA 1885112
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|| ||| | || ||||| || |||||||| |||||| || ||| || | || || |||
Sbjct 1885113 CAAAGATTGATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACCTTGTCTGACTACAAC 1885172
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780
|||||||| ||||| ||| ||||| |||| | ||||| |||| ||
Sbjct 1885173 ATTCAAAAGGAATCCACTTTGCACTTGGTCCTTAGATTGAGAGGTGG 1885219
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
|||||||| || || || || || || ||||| ||||| || ||| ||| | ||
Sbjct 1884765 ATGCAAATCTTCGTTAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCCTCT 1884824
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | | | ||||| ||| || ||||| || || | || |||||||
Sbjct 1884825 GACACTATTGACAACGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCAGATCAA 1884884
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|| ||| | || ||||| || |||||||| |||||| || ||| || | || || |||
Sbjct 1884885 CAAAGATTGATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACCTTGTCTGACTACAAC 1884944
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
|||||||| || || ||| ||||| |||| | ||||| |||| || ||
Sbjct 1884945 ATTCAAAAGGAGTCCACTTTGCACTTGGTCCTTAGATTGAGAGGTGGTAT 1884994
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425404571876676
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |