Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq6 143 5e-29 seq1 141 2e-28 seq5 116 7e-21 seq4 114 3e-20 >seq6 Length=1504906 Score = 143 bits (158), Expect = 5e-29 Identities = 163/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367 ||||||||| | | || || || || || || | || ||| || ||||| || |||| Sbjct 99698 ACCACCTCTCAATCTCAAAACCAAGTGCAAGGTGGATTCCTTTTGA-ATATTGTAGTCAG 99640 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 | || |||| |||| || ||||| |||||||||||||| ||||| ||||||||||||| Sbjct 99639 ACAAGGTTCTGCCATCTTCTAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTG 99580 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 | || |||||||| ||||| || ||| ||| ||||| || | || || ||||| | Sbjct 99579 GGATACCTTCTTTGTCTTGAATCTTAGATTTGACATTGTCAATGGTGTCGGAAGATTCAA 99520 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAA 192523 |||| | ||||| || |||||||| || ||||||| Sbjct 99519 CTTCCAAGGTAATAGTCTTACCAGTCAAAGTTTTAA 99484 >seq1 Length=3127730 Score = 141 bits (156), Expect = 2e-28 Identities = 172/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365 ||||||||||| | | | || || || ||||| | ||| ||| || || || || || Sbjct 1884766 ATACCACCTCTCAATCTAAGGACCAAGTGCAAAGTGGACTCCTTTTGA-ATGTTGTAGTC 1884708 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 ||| || |||| |||| || ||||||||||||||||| || ||||| |||||||| || Sbjct 1884707 AGACAAGGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGG 1884648 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 ||| || ||||| || ||||| || || || || || |||| || || ||||| Sbjct 1884647 TGGAATACCTTCCTTGTCTTGAATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTC 1884588 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||| | ||| ||||| |||||||| || || |||| ||| || |||||| Sbjct 1884587 AACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTAACAAAGATTTGCATT 1884536 Score = 134 bits (148), Expect = 3e-26 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365 ||||||||||| | | | || || || ||||| | ||| ||| || || || || || Sbjct 1884994 ATACCACCTCTCAATCTAAGGACCAAGTGCAAAGTGGACTCCTTTTGA-ATGTTGTAGTC 1884936 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 ||| || |||| |||| || ||||||||||||||||| || ||||| |||||||| || Sbjct 1884935 AGACAAGGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGG 1884876 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 ||| || ||||| || ||||| || || || || || |||| || || ||||| Sbjct 1884875 TGGAATACCTTCCTTGTCTTGAATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTC 1884816 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | ||| ||||| |||||||| || || |||| || || ||||| Sbjct 1884815 AACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 1884765 Score = 127 bits (140), Expect = 4e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367 ||||||||| | | | || || || ||||| | || ||| || || || || |||| Sbjct 1885220 ACCACCTCTCAATCTAAGGACCAAGTGCAAAGTGGATTCCTTTTGA-ATGTTGTAGTCAG 1885162 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 | || |||| |||| || ||||||||||||||||| || ||||| |||||||| |||| Sbjct 1885161 ACAAGGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTG 1885102 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 | || ||||| || ||||| || || || || || |||| || || ||||| | Sbjct 1885101 GAATACCTTCCTTGTCTTGAATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCAA 1885042 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 |||| | ||| ||||| |||||||| || || |||| || || ||||| Sbjct 1885041 CTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 1884993 >seq5 Length=1624186 Score = 116 bits (128), Expect = 7e-21 Identities = 317/480 (66%), Gaps = 9/480 (2%) Strand=Plus/Minus Query 49592 CATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATACATA-TAATA 49650 ||| |||||||| ||||| || ||||| || ||| | || | | ||| ||| | Sbjct 610634 CATGAAATCAAAAGGATTGTTCACGTTATA-TACTTTATTGTTACCTAAGGATACTAACA 610576 Query 49651 ATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCAATAATT 49710 | | ||||| ||||| || |||||||| |||||| |||||| || || || Sbjct 610575 ACCGGTCGGCAACAAACTCCACATATTGGTTCATTAAAGTGGCATTCATTCCTAACAAGG 610516 Query 49711 TAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaattatca 49770 | | | || ||||| | | ||| |||||||| | ||||||| | || || Sbjct 610515 ATACAGAAAGAGCGTCATCGAAATATTTCTTTTCTATAGCAACAGCTTCGGTGATGATTT 610456 Query 49771 taattatattattttttgat--aatttatatttaatatgattcgcatatattaaACATGC 49828 | || | || |||| || ||||| | || | |||| | || | || ||| || Sbjct 610455 T--TTCAACAATCTTTTTATCCAATTTGTTTTGCAAATGA---GAGTACAATAGACACGC 610401 Query 49829 AAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGG 49888 |||||||||||| || || |||||||| || || || ||| ||| || || ||||| Sbjct 610400 AAAATCAGTATGCAAGCCTTCGTCCCTGCTAATCAACTCGTTAGAAAACGTCAAACCTGG 610341 Query 49889 CATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACC 49948 ||| | ||||| ||||| | |||||| ||||| ||||| | || || ||||| || Sbjct 610340 CATGAGACCTCTTTTTTTCAACCAAAAGATTGAAGCAAACGATCCTGAGAAAAATATTCC 610281 Query 49949 CTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAATATCCA 50008 || || ||||| || | | | | || |||||| || || || ||||| Sbjct 610280 TTCTACGGCAGCAAAGGCAACAAGACGTTCTGCAAACAAAGCGTTGTCGTCGTTGATCCA 610221 Query 50009 ATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAATAA 50068 | || |||||| || ||||| | |||||| |||||| |||| || || || || || Sbjct 610220 ACGTAAAGCCCAGTCAGCTTTCTCTTTGATGCTCGGTATAGTTTCGATGGCATTGAACAA 610161 >seq4 Length=1632271 Score = 114 bits (126), Expect = 3e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||||||||| | | | || || || ||||| | || || ||| || || || || Sbjct 76480 ACCACCTCTCAATCTGAGGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGA 76539 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 || |||| | || ||||| || |||||||||||||| ||||| ||||| || ||||| Sbjct 76540 CAAGGTTCTGCCGTCTTCCAACTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGG 76599 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || |||||||| ||||| || || ||| ||||| || | || || || || || Sbjct 76600 AATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCCGAGGACTCCAC 76659 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 ||| | |||||||||||||| || | ||||| | || || ||||| || Sbjct 76660 TTCCAAGGTAATGGTTTTACCGGTAAGGGTTTTGACGAAAATTTGCATCTT 76710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984479444999400