Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq4 129 2e-24 seq5 116 1e-20 >seq4 Length=1632271 Score = 129 bits (142), Expect = 2e-24 Identities = 601/929 (65%), Gaps = 29/929 (3%) Strand=Plus/Minus Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCAC 155646 ||| ||| |||| ||||| || ||||| || || || ||||| |||||||||| Sbjct 1009317 CAACAGAAGCCAAGTTACAAACAGCAGTTTCGTTTGGATCAGAATATTCAACAATCTCAC 1009258 Query 155647 AGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAG 155706 | |||| ||| || ||||| | || | |||||| |||||||||||| |||||| | Sbjct 1009257 AACACAAGTTGGACGATTTGATTATACCGAGATTCTTTTGGTTAGATTTAGCGTTACAGG 1009198 Query 155707 CATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCC 155766 |||||||||||| ||| |||| || || || || | || || |||| || || Sbjct 1009197 CATCCTTGTATAACATGAATGGAGTACCGGTTTCAGTTTGAGCTTCCAAGATGGAATACC 1009138 Query 155767 AGAGGTCACGGGCATTAA-TTTGCTTGTTGTATCTGCCTTC-CG-ACTCATATTTCATAT 155823 | | | | || |||| | | ||| | | | | ||||| || | || ||||||| Sbjct 1009137 ACAACTTTTGAGCTTTAACTGTTCTTCTGCTCT-TACCTTCACGTTCGTATTTTTCATAC 1009079 Query 155824 ACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTT-ATCGGGGCAA 155882 | ||| ||| | |||||||| ||| ||| || || ||| |||| | || | Sbjct 1009078 AAAGC-TTC-AAACTCCTCACCATAAGTGTCAGCCAAACCTGGG-ACTTCGTTTGGAGAG 1009022 Query 155883 AACAGCGACCAA--ATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAA 155940 || || |||||| | | || | | || | || |||||| | ||| ||| | Sbjct 1009021 AATAGGGACCAATCCTGGTTTTTCTCA--ACCCTCTTCATAAACAAATCGGAAATCCACA 1008964 Query 155941 TAGCATAGAAA-AGGTCCCTTGCCTTTGA-CTCCTCATCGCCGTGATTCTTCCGTAGCTC 155998 || | |||| | ||| || | || ||| || || | |||||||| || | | || Sbjct 1008963 -AGGCTGGAAACAAGTCTCTAG-CTCTGATTTCTTCTTTACCGTGATTTTTTCTGATATC 1008906 Query 155999 TAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCT 156058 | || || ||||| | ||| |||||| | ||| ||||| ||| |||| || Sbjct 1008905 AATAAAATCAAAGATATCTGAATGCCATGGCTCAACATAGATAGCGAAAGCACCAGGTCT 1008846 Query 156059 CTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAAT 156115 ||| ||||| ||||| ||||| | |||||| || ||||| || | | ||| ||||| Sbjct 1008845 TTTGTTACCACCTTGATCAACATATCTAGCAGTATTGTTGAAAACTCTCAACATTGGAAT 1008786 Query 156116 AATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATG 156175 ||||| |||||||| || ||||| || || | ||| |||| | | | ||| | Sbjct 1008785 GATACCGTTGGAAGTACCGTTGGTACCAGCTATGTACGACCCAGTGGCTCTGATATTGTT 1008726 Query 156176 AATATGTAGTCCAATACCACCTGACCAT--TTAGAAATTTGAGCGCATTCCTTT-ACAGT 156232 || || | ||||||||||| | ||| ||| || || |||| ||| | || Sbjct 1008725 GATGTGCAAACCAATACCACC--AGCATGCTTACTGATGATGGC-CATTTGTTTCAATGT 1008669 Query 156233 ATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTG 156292 | ||||| || ||||| || |||| || ||| | | || | || || | | | Sbjct 1008668 TTCAAAAATGCCGTCAATGGAGTCATTTTTCATGGCAACAAGGAAACAAGA--TGACATC 1008611 Query 156293 AGGTCG--TGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTA 156350 || || ||| || ||||| ||||| | ||||| | ||||| | ||||| || | Sbjct 1008610 TGGGCGTTTGGAGTACCAGCATTGAACAAAGTAGGAGAAGCATGGGTGAAATATTTGAGA 1008551 Query 156351 GACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAG 156410 ||||| | | ||| || || ||| || || | || ||||||| |||| Sbjct 1008550 GACATCAAGTTGTAAGTTTCAATAACTTTTGGAATGTCTTCACCATGAATACCAATAGCC 1008491 Query 156411 ACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTAT 156470 || ||||| || ||| ||||| | || |||| |||| ||||| || | ||| Sbjct 1008490 ACTCTCATAATCAAATGTTGAGGTCTTTCAGCAATTTTGCCATTAATTCTCAACAAGTAA 1008431 Query 156471 GCGCGTTCCAGAGTTTTAAACCCGAAATA 156499 | | ||||| ||| || || || || || Sbjct 1008430 GATCTTTCCAAAGTCTTGAAACCAAAGTA 1008402 >seq5 Length=1624186 Score = 116 bits (128), Expect = 1e-20 Identities = 293/437 (67%), Gaps = 14/437 (3%) Strand=Plus/Plus Query 133227 TTTTAGCGTTTTTTGCTGCGAGTGATGGTATTGTTCTTGAAAATTTAG-GAACACGGTTT 133285 ||||||||||||||||||| ||||| || ||||| ||||||| ||| | | | ||| Sbjct 609973 TTTTAGCGTTTTTTGCTGCCAGTGACGGCATTGTCAATGAAAATCTAGTGCAAAACTTTT 610032 Query 133286 ATGGGAGAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAA 133345 | ||| || ||| || ||| || ||| ||||| | || || ||||||| Sbjct 610033 CTAC-AGAGGTGCAAGTGAGCGAGGCAAAATGCTTCTATGGATTTCAAATAATGATGGAA 610091 Query 133346 AATATCCATTCTATCACATATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAG 133405 || || ||||| || ||||| || || |||||||| ||||||||| | || Sbjct 610092 AACATACATTCCGAGACCTATTCCTTACTTATAGATACTTATATCAAAGAT--CAGAAAG 610149 Query 133406 AAGCACAAAC--TATTCAACGCCATTAGCGAATTT---CCTTGTATTAAAAAGAAATCTG 133460 | ||| || | ||||| ||||| |||| | || | || ||| ||||| ||| Sbjct 610150 AGGCAGAATTCTTGTTCAATGCCAT---CGAAACTATACCGAGCATCAAAGAGAAAGCTG 610206 Query 133461 ACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTT 133520 |||||||| | |||||| | ||| | || ||||| ||||| ||||| | Sbjct 610207 ACTGGGCTTTACGTTGGATCAACGACGACAACGCTTTGTTTGCAGAACGTCTTGTTGCCT 610266 Query 133521 TTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCT-CTATTTTTTGGCTTAAA 133579 |||||| ||||| || || |||||| || |||| |||| | || |||||| | ||| Sbjct 610267 TTGCTGCCGTAGAAGGAATATTTTTCTCAGGATCGTT-TGCTTCAATCTTTTGGTTGAAA 610325 Query 133580 AAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCA 133639 || | ||| | | || || || ||||||||||| | ||| |||||||| | Sbjct 610326 AAAAGAGGTCTCATGCCAGGTTTGACGTTTTCTAACGAGTTGATTAGCAGGGACGAAGGC 610385 Query 133640 CTTCACACCGAATTTGC 133656 | || || || ||||| Sbjct 610386 TTGCATACTGATTTTGC 610402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816770262828