Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03-
01] 44 sequences; 16,719,687 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq1 100 3e-16
seq6 91.5 1e-13
seq4 89.7 5e-13
>seq1
Length=3127730
Score = 100 bits (110), Expect = 3e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274
|| ||||| ||||| |||||||| || || || || ||||| | ||||||||||
Sbjct 1885189 GTGGATTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAATTGTTTACCA 1885130
Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334
||| | |||| | ||| ||||| || || || ||||| ||||| ||| ||| ||
Sbjct 1885129 GCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCCTTGTCTTGAATCTTTGACTTG 1885070
Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394
| | || | ||||| | || ||| ||||| | ||| | ||||| || ||||| ||
Sbjct 1885069 ACGTTGTCAATAGTGTCAGAGGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAGGTC 1885010
Query 137395 TTTACGAATATTTGCATA 137412
|| ||||| |||||||||
Sbjct 1885009 TTAACGAAGATTTGCATA 1884992
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274
|| || || ||||| |||||||| || || || || ||||| | ||||||||||
Sbjct 1884961 GTGGACTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAATTGTTTACCA 1884902
Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334
||| | |||| | ||| ||||| || || || ||||| ||||| ||| ||| ||
Sbjct 1884901 GCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCCTTGTCTTGAATCTTTGACTTG 1884842
Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394
| | || | ||||| | || ||| ||||| | ||| | ||||| || ||||| ||
Sbjct 1884841 ACGTTGTCAATAGTGTCAGAGGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAGGTC 1884782
Query 137395 TTTACGAATATTTGCATA 137412
|| ||||| |||||||||
Sbjct 1884781 TTAACGAAGATTTGCATA 1884764
Score = 89.7 bits (98), Expect = 5e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274
|| || || ||||| |||||||| || || || || ||||| | ||||||||||
Sbjct 1884733 GTGGACTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAATTGTTTACCA 1884674
Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334
||| | |||| | ||| ||||| || || || ||||| ||||| ||| ||| ||
Sbjct 1884673 GCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCCTTGTCTTGAATCTTTGACTTG 1884614
Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394
| | || | ||||| | || ||| ||||| | ||| | ||||| || ||||| ||
Sbjct 1884613 ACGTTGTCAATAGTGTCAGAGGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAGGTC 1884554
Query 137395 TTTACGAATATTTGCAT 137411
|| || || ||||||||
Sbjct 1884553 TTAACAAAGATTTGCAT 1884537
>seq6
Length=1504906
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
|| |||| || | |||||| || || | || ||||| ||||| || ||||| || |
Sbjct 99697 CCACCTCTCAATCTCAAAACCAAGTGCAAGGTGGATTCCTTTTGAATATTGTAGTCAGAC 99638
Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304
| || || ||||| | ||| ||||||||| |||||| | ||| ||||| || ||
Sbjct 99637 AAGGTTCTGCCATCTTCTAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGG 99578
Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364
|| ||||||||||| ||| || ||| | | || | ||||| | | ||| |||
Sbjct 99577 ATACCTTCTTTGTCTTGAATCTTAGATTTGACATTGTCAATGGTGTCGGAAGATTCAACT 99518
Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAA 137402
|| | || | ||||| || ||||| ||||| |||||
Sbjct 99517 TCCAAGGTAATAGTCTTACCAGTCAAAGTTTTAACGAA 99480
>seq4
Length=1632271
Score = 89.7 bits (98), Expect = 5e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274
|| ||||| ||||| |||||||| ||| || || || |||||| | || ||||||
Sbjct 76511 GTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCGTCTTCCAACTGCTTACCA 76570
Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334
||| |||||| | ||| || || || || || ||||||||||| ||| || |||
Sbjct 76571 GCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCTTTGTCTTGAATCTTGGATTTG 76630
Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394
| | || | ||||| | || || ||||| | || | || || ||||| | |||
Sbjct 76631 ACATTGTCAATGGTGTCCGAGGACTCCACTTCCAAGGTAATGGTTTTACCGGTAAGGGTT 76690
Query 137395 TTTACGAATATTTGCAT 137411
|| ||||| ||||||||
Sbjct 76691 TTGACGAAAATTTGCAT 76707
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488543731300800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |