Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq1 100 3e-16 seq6 91.5 1e-13 seq4 89.7 5e-13 >seq1 Length=3127730 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 || ||||| ||||| |||||||| || || || || ||||| | |||||||||| Sbjct 1885189 GTGGATTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAATTGTTTACCA 1885130 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 ||| | |||| | ||| ||||| || || || ||||| ||||| ||| ||| || Sbjct 1885129 GCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCCTTGTCTTGAATCTTTGACTTG 1885070 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | || | ||||| | || ||| ||||| | ||| | ||||| || ||||| || Sbjct 1885069 ACGTTGTCAATAGTGTCAGAGGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAGGTC 1885010 Query 137395 TTTACGAATATTTGCATA 137412 || ||||| ||||||||| Sbjct 1885009 TTAACGAAGATTTGCATA 1884992 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 || || || ||||| |||||||| || || || || ||||| | |||||||||| Sbjct 1884961 GTGGACTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAATTGTTTACCA 1884902 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 ||| | |||| | ||| ||||| || || || ||||| ||||| ||| ||| || Sbjct 1884901 GCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCCTTGTCTTGAATCTTTGACTTG 1884842 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | || | ||||| | || ||| ||||| | ||| | ||||| || ||||| || Sbjct 1884841 ACGTTGTCAATAGTGTCAGAGGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAGGTC 1884782 Query 137395 TTTACGAATATTTGCATA 137412 || ||||| ||||||||| Sbjct 1884781 TTAACGAAGATTTGCATA 1884764 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 || || || ||||| |||||||| || || || || ||||| | |||||||||| Sbjct 1884733 GTGGACTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAATTGTTTACCA 1884674 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 ||| | |||| | ||| ||||| || || || ||||| ||||| ||| ||| || Sbjct 1884673 GCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCCTTGTCTTGAATCTTTGACTTG 1884614 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | || | ||||| | || ||| ||||| | ||| | ||||| || ||||| || Sbjct 1884613 ACGTTGTCAATAGTGTCAGAGGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAGGTC 1884554 Query 137395 TTTACGAATATTTGCAT 137411 || || || |||||||| Sbjct 1884553 TTAACAAAGATTTGCAT 1884537 >seq6 Length=1504906 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || |||| || | |||||| || || | || ||||| ||||| || ||||| || | Sbjct 99697 CCACCTCTCAATCTCAAAACCAAGTGCAAGGTGGATTCCTTTTGAATATTGTAGTCAGAC 99638 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || || ||||| | ||| ||||||||| |||||| | ||| ||||| || || Sbjct 99637 AAGGTTCTGCCATCTTCTAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGG 99578 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||||||||| ||| || ||| | | || | ||||| | | ||| ||| Sbjct 99577 ATACCTTCTTTGTCTTGAATCTTAGATTTGACATTGTCAATGGTGTCGGAAGATTCAACT 99518 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAA 137402 || | || | ||||| || ||||| ||||| ||||| Sbjct 99517 TCCAAGGTAATAGTCTTACCAGTCAAAGTTTTAACGAA 99480 >seq4 Length=1632271 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 || ||||| ||||| |||||||| ||| || || || |||||| | || |||||| Sbjct 76511 GTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCGTCTTCCAACTGCTTACCA 76570 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 ||| |||||| | ||| || || || || || ||||||||||| ||| || ||| Sbjct 76571 GCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCTTTGTCTTGAATCTTGGATTTG 76630 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | || | ||||| | || || ||||| | || | || || ||||| | ||| Sbjct 76631 ACATTGTCAATGGTGTCCGAGGACTCCACTTCCAAGGTAATGGTTTTACCGGTAAGGGTT 76690 Query 137395 TTTACGAATATTTGCAT 137411 || ||||| |||||||| Sbjct 76691 TTGACGAAAATTTGCAT 76707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488543731300800