Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq4 168 2e-36 seq3 109 1e-18 >seq4 Length=1632271 Score = 168 bits (186), Expect = 2e-36 Identities = 565/869 (65%), Gaps = 19/869 (2%) Strand=Plus/Plus Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361 |||| ||||||||||| ||| | ||| | |||| || | | | |||||| | || Sbjct 1008400 ACTACTTTGGTTTCAAGACTTTGGAAAGATCTTACTTGTTGAGAATTAATGGCAAAATTG 1008459 Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTA 110421 |||| | |||||||| || || | | || || |||||||||||||| | || ||| Sbjct 1008460 CTGAAAGACCTCAACATTTGATTATGAGAGTGGCTATTGGTATTCATGGTGAAGACATTC 1008519 Query 110422 AAGCTGTTATTGAATGTTA-----TGATGTATTAAGTAAAAAGAAAGCTATTCATGCTAC 110476 | ||||||||| ||| |||||| | ||| | | | |||||| | Sbjct 1008520 CAAAAGTTATTGAAACTTACAACTTGATGTCTCTC----AAATATTTC-ACCCATGCTTC 1008574 Query 110477 TCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGG 110536 |||||| | || || || || ||| | || || | ||||| || ||| | | Sbjct 1008575 TCCTACTTTGTTCAATGCTGGTACTCCAAACGCCCAGATGTCATCTTGTTTCCTTGTTGC 1008634 Query 110537 AATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTC 110596 || || |||| || ||||| || |||| ||| | | ||| ||| || | || Sbjct 1008635 CATGAAAAATGACTCCATTGACGGCATTTTTGAAACATTGAAACAAATGGCCATCATCAG 1008694 Query 110597 TAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATAT 110656 ||| | |||| || |||||| | ||| | | |||| | | | || | | || Sbjct 1008695 TAAGCATGCTGGTGGTATTGGTTTGCACATCAACAATATCAGAGCCACTGGGTCGTACAT 1008754 Query 110657 CGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACAC 110716 || | || ||| |||| | || | |||||||||| ||||| |||||| | || Sbjct 1008755 AGCTGGTACCAACGGTACTTCCAACGGTATCATTCCAATGTTGAGAGTTTTCAACAATAC 1008814 Query 110717 TGCAAAATATGTGAATCAAGGTGGTAAGAGAAA---TGGCTCATTTGCTATCTATCTCGA 110773 ||| | |||||| ||||||||||||| | || ||| | || ||||||||| | || Sbjct 1008815 TGCTAGATATGTTGATCAAGGTGGTAACAAAAGACCTGGTGCTTTCGCTATCTATGTTGA 1008874 Query 110774 ACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGA 110833 || |||||||||||||| ||||| || | || | | |||||||| || ||||| Sbjct 1008875 GCCATGGCATTCAGATATCTTTGATTTTATTGATATCAGAAAAAATCACGGTAAAGAAGA 1008934 Query 110834 ACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGT 110893 | ||||| | || || ||| || |||||||||| ||||| || ||||| | || Sbjct 1008935 AATCAGAGCTAGAGACTTGTTTCCAGCCTTGTGGATTTCCGATTTGTTTATGAAGAGGGT 1008994 Query 110894 TCA-AGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCT-CCTGGTCTATCTGAT 110951 | | | ||| | || ||||| || | | ||| | || | || ||| | |||| Sbjct 1008995 TGAGAAAAACCAGGAT-TGGTCCCTATTCTCTCC-AAACGAAGTCCCAGGTTTGGCTGAC 1009052 Query 110952 GTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGC 111011 ||||| | |||||||||| | || |||||||| ||| ||||| ||| | Sbjct 1009053 ACTTATGGTGAGGAGTTTGAAGCTTTGTATGAAAAATACGAACGTGAAGGTAAGAGCAGA 1009112 Query 111012 AAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGA 111071 | | | || ||||||| | | |||| ||| | ||| | ||| |||||| || Sbjct 1009113 AGAACAGTTAAAGCTCAAAAGTTGTGGTATTCCATCTTGGAAGCTCAAACTGAAACCGGT 1009172 Query 111072 ACTCCTTATATTTTGTATAAAGATCATATTAATCGC-AAATCTAATCAAATGAATTTAGG 111130 ||||| | || || || || ||| ||| ||| |||||||| |||| |||| | || Sbjct 1009173 ACTCCATTCATGTTATACAAGGATGCCTGTAA-CGCTAAATCTAACCAAAAGAATCTCGG 1009231 Query 111131 AACAATTAAGTCTAGTAATTTGTGCTGTG 111159 | ||| || || || ||||| |||| Sbjct 1009232 TATAATCAAATCGTCCAACTTGTGTTGTG 1009260 >seq3 Length=1747969 Score = 109 bits (120), Expect = 1e-18 Identities = 136/182 (75%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 305309 CATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCT 305368 ||||||| |||| | ||| || |||||||||| ||||| ||| | |||||||||||| Sbjct 175699 CATTTGATTGACGAAGATCCAGTGTTGTTCAATAGACAACCTTCATTACATAAAATGTCT 175758 Query 305369 ATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGACATTTCG-ATTAA-ATGTAAGTG 305426 ||||||||||||| || |||||| | | | ||| || || || || ||| ||| Sbjct 175759 ATGATGGCTCATAGGGTAAAAGTAATGCCGTTCTCGACGTTCCGTATCAACTTGTCGGTG 175818 Query 305427 -CTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAA 305485 | | | ||||| ||||| ||||| ||||| |||||||||||| |||| || || || Sbjct 175819 ACAT---CCCCTTACAATGCTGATTTCGATGGTGATGAAATGAATTTGCACGTTCCACAG 175875 Query 305486 TC 305487 || Sbjct 175876 TC 175877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812130934284