Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03-
01] 44 sequences; 16,719,687 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq1 111 1e-19
seq4 105 4e-18
seq6 89.7 3e-13
>seq1
Length=3127730
Score = 111 bits (122), Expect = 1e-19
Identities = 174/245 (71%), Gaps = 3/245 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | | ||||| || | |||| ||| ||||| |||||||| || ||
Sbjct 1884764 ACCACCTCTCAATCTAAGGACCAAGTGCAAAGTGGACTCCTTTTGAATGTTGTAGTCAGA 1884705
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | | || || |||||||| || ||||||||||| | || |||||| | ||
Sbjct 1884704 CAAGGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGG 1884645
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| ||| || || | || | ||| | ||||| ||||| |
Sbjct 1884644 AATACCTTCCTTGTCTTGAATCTT-TGACTTGACGTTGTCAATAGTGTCAGAGGATTCAA 1884586
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTTGGTG-TG 33759
| || | ||||| || ||||| || || || || |||||||| ||||| | ||| ||
Sbjct 1884585 CTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTAACAAAGATTTGCATTATGTGTGATG 1884526
Query 33760 TTTAT 33764
|||||
Sbjct 1884525 TTTAT 1884521
Score = 105 bits (116), Expect = 4e-18
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | | ||||| || | |||| ||| ||||| |||||||| || ||
Sbjct 1884992 ACCACCTCTCAATCTAAGGACCAAGTGCAAAGTGGACTCCTTTTGAATGTTGTAGTCAGA 1884933
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | | || || |||||||| || ||||||||||| | || |||||| | ||
Sbjct 1884932 CAAGGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGG 1884873
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| ||| || || | || | ||| | ||||| ||||| |
Sbjct 1884872 AATACCTTCCTTGTCTTGAATCTT-TGACTTGACGTTGTCAATAGTGTCAGAGGATTCAA 1884814
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| || ||||| || || || || || ||||| ||||||
Sbjct 1884813 CTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCATA 1884764
Score = 102 bits (112), Expect = 5e-17
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | | ||||| || | |||| || ||||| |||||||| || ||
Sbjct 1885220 ACCACCTCTCAATCTAAGGACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCAGA 1885161
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | | || || |||||||| || ||||||||||| | || |||||| | ||
Sbjct 1885160 CAAGGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGG 1885101
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| ||| || || | || | ||| | ||||| ||||| |
Sbjct 1885100 AATACCTTCCTTGTCTTGAATCTT-TGACTTGACGTTGTCAATAGTGTCAGAGGATTCAA 1885042
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| || ||||| || || || || || ||||| ||||||
Sbjct 1885041 CTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCATA 1884992
>seq4
Length=1632271
Score = 105 bits (116), Expect = 4e-18
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
||||||||||||| | | ||||| || | |||| || ||||| |||||||| ||||
Sbjct 76479 CACCACCTCTCAATCTGAGGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGG 76538
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| | || | |||| ||||| || || || ||||| ||||| | || || ||| | |
Sbjct 76539 ACAAGGTTCTGCCGTCTTCCAACTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTG 76598
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | |||||||||||| ||| || | || |||| ||| | |||||| || |||
Sbjct 76599 GAATACCTTCTTTGTCTTGAATCTT-GGATTTGACATTGTCAATGGTGTCCGAGGACTCC 76657
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| || | || || |||||||| || | ||||| || || || |||||
Sbjct 76658 ACTTCCAAGGTAATGGTTTTACCGGTAAGGGTTTTGACGAAAATTTGCAT 76707
>seq6
Length=1504906
Score = 89.7 bits (98), Expect = 3e-13
Identities = 154/221 (70%), Gaps = 2/221 (1%)
Strand=Plus/Minus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
||||||||||||| | || ||||| || | ||| || ||||| || ||||| || |
Sbjct 99699 CACCACCTCTCAATCTCAAAACCAAGTGCAAGGTGGATTCCTTTTGAATATTGTAGTCAG 99640
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| | || | | || || ||||| || || ||||| ||||| | || ||||| | |
Sbjct 99639 ACAAGGTTCTGCCATCTTCTAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTG 99580
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | |||||||||||| ||| || | || |||| ||| | ||||||| |||||
Sbjct 99579 GGATACCTTCTTTGTCTTGAATCTT-AGATTTGACATTGTCAATGGTGTCGGAAGATTCA 99521
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAA 33740
|| || | || || || ||||| || || ||||| || ||
Sbjct 99520 ACTTCCAAGGTAATAGTCTTACCAGTCAAAGTTTTAACGAA 99480
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328703823732480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |