Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq4 113 1e-19 seq1 95.1 3e-14 seq6 87.8 4e-12 >seq4 Length=1632271 Score = 113 bits (124), Expect = 1e-19 Identities = 139/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| || || || ||||| || || ||||||||||| || ||||| | || Sbjct 76693 CAAAACCCTTACCGGTAAAACCATTACCTTGGAAGTGGAGTCCTCGGACACCATTGACAA 76634 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || || ||||||||||| |||||||| ||| || ||| |||||| | ||||| Sbjct 76633 TGTCAAATCCAAGATTCAAGACAAAGAAGGTATTCCACCAGACCAACAAAGATTGATCTT 76574 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || |||||||||||||| || || || ||| |||| |||||| |||| || || || Sbjct 76573 TGCTGGTAAGCAGTTGGAAGACGGCAGAACCTTGTCCGACTACAACATCCAAAAGGAATC 76514 Query 206364 TACTCTTCAC 206373 ||| | ||| Sbjct 76513 CACTTTGCAC 76504 >seq1 Length=3127730 Score = 95.1 bits (104), Expect = 3e-14 Identities = 129/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || |||||||||||||| ||| |||||||| | || || ||| | Sbjct 1884561 ACTGGTAAGACCATCACTTTGGAAGTTGAATCCTCTGACACTATTGACAACGTCAAGTCA 1884620 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| || ||||| ||| || || |||||| | || || || || || Sbjct 1884621 AAGATTCAAGACAAGGAAGGTATTCCACCAGATCAACAAAGATTGATTTTTGCTGGTAAA 1884680 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || || |||||||| || || ||| | || |||||| | || || ||||| ||| | ||| Sbjct 1884681 CAATTAGAAGATGGTAGAACCTTGTCTGACTACAACATTCAAAAGGAGTCCACTTTGCAC 1884740 Score = 95.1 bits (104), Expect = 3e-14 Identities = 129/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || |||||||||||||| ||| |||||||| | || || ||| | Sbjct 1884789 ACTGGTAAGACCATCACTTTGGAAGTTGAATCCTCTGACACTATTGACAACGTCAAGTCA 1884848 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| || ||||| ||| || || |||||| | || || || || || Sbjct 1884849 AAGATTCAAGACAAGGAAGGTATTCCACCAGATCAACAAAGATTGATTTTTGCTGGTAAA 1884908 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || || |||||||| || || ||| | || |||||| | || || ||||| ||| | ||| Sbjct 1884909 CAATTAGAAGATGGTAGAACCTTGTCTGACTACAACATTCAAAAGGAGTCCACTTTGCAC 1884968 Score = 91.5 bits (100), Expect = 3e-13 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || |||||||||||||| ||| |||||||| | || || ||| | Sbjct 1885017 ACTGGTAAGACCATCACTTTGGAAGTTGAATCCTCTGACACTATTGACAACGTCAAGTCA 1885076 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| || ||||| ||| || || |||||| | || || || || || Sbjct 1885077 AAGATTCAAGACAAGGAAGGTATTCCACCAGATCAACAAAGATTGATTTTTGCTGGTAAA 1885136 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || || |||||||| || || ||| | || |||||| | || || || || ||| | ||| Sbjct 1885137 CAATTAGAAGATGGTAGAACCTTGTCTGACTACAACATTCAAAAGGAATCCACTTTGCAC 1885196 >seq6 Length=1504906 Score = 87.8 bits (96), Expect = 4e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || || || || || || |||||||| ||| ||| ||||| | || Sbjct 99486 AAAACTTTGACTGGTAAGACTATTACCTTGGAAGTTGAATCTTCCGACACCATTGACAAT 99545 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || || ||||||||||| |||||||| || || || |||||| | ||||| Sbjct 99546 GTCAAATCTAAGATTCAAGACAAAGAAGGTATCCCACCTGATCAACAAAGATTGATCTTT 99605 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| || |||||||| || || ||| | || ||||| | || || || || Sbjct 99606 GCTGGTAAGCAATTAGAAGATGGCAGAACCTTGTCTGACTACAATATTCAAAAGGAATCC 99665 Query 206365 ACTCTTCACCTTGTTTTGAGA 206385 || | ||| | ||||||||| Sbjct 99666 ACCTTGCACTTGGTTTTGAGA 99686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820133748524