Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1 104 2e-17 seq6 82.4 7e-11 >seq1 Length=3127730 Score = 104 bits (114), Expect = 2e-17 Identities = 165/234 (71%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || || | ||||| || || || |||||||||||||||||| || | | Sbjct 1884763 CCACCTCTCAATCTAAGGACCAAGTGCAAAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 1884704 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 ||||||| | || || | || ||||| ||||| ||||| | || || || | ||| Sbjct 1884703 AAGGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGA 1884644 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | |||||||| |||||| ||| | |||| | | ||||| ||||| || Sbjct 1884643 ATACCTTCCTTGTCTTGAATCTTTGACTTGA-CGTTGTCAATAGTGTCAGAGGATTCAAC 1884585 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTGTG 35742 |||| ||||| || ||||| ||||| || || ||||| || |||||| |||| Sbjct 1884584 TTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTAACAAAGATTTGCATTATGTG 1884531 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || || | ||||| || || || |||||||||||||||||| || | | Sbjct 1884991 CCACCTCTCAATCTAAGGACCAAGTGCAAAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 1884932 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 ||||||| | || || | || ||||| ||||| ||||| | || || || | ||| Sbjct 1884931 AAGGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGA 1884872 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | |||||||| |||||| ||| | |||| | | ||||| ||||| || Sbjct 1884871 ATACCTTCCTTGTCTTGAATCTTTGACTTGA-CGTTGTCAATAGTGTCAGAGGATTCAAC 1884813 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| ||||| || ||||| ||||| || || || || || ||||| Sbjct 1884812 TTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 1884765 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || || | ||||| || || || ||||||||||||||||| || | | Sbjct 1885219 CCACCTCTCAATCTAAGGACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCAGAC 1885160 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 ||||||| | || || | || ||||| ||||| ||||| | || || || | ||| Sbjct 1885159 AAGGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGA 1885100 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | |||||||| |||||| ||| | |||| | | ||||| ||||| || Sbjct 1885099 ATACCTTCCTTGTCTTGAATCTTTGACTTGA-CGTTGTCAATAGTGTCAGAGGATTCAAC 1885041 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| ||||| || ||||| ||||| || || || || || ||||| Sbjct 1885040 TTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 1884993 >seq6 Length=1504906 Score = 82.4 bits (90), Expect = 7e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || ||||| ||||| || || || ||||||||||| ||||| || | | Sbjct 99697 CCACCTCTCAATCTCAAAACCAAGTGCAAGGTGGATTCCTTTTGAATATTGTAGTCAGAC 99638 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 ||||||| | || || | |||||||| ||||| ||||| | || || || | || Sbjct 99637 AAGGTTCTGCCATCTTCTAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGG 99578 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | || ||||| ||||| || | | | | | |||||| ||||| || Sbjct 99577 ATACCTTCTTTGTCTTGAATCTTAGATTTGACATTGTCAATGGTGTCGGAAGATTCAACT 99518 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAA 35727 |||| || || || ||||| ||||||||||| || || Sbjct 99517 TCCAAGGTAATAGTCTTACCAGTCAAAGTTTTAACGAA 99480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793352063520