Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq4 141 9e-29 seq6 138 1e-27 seq1 134 1e-26 >seq4 Length=1632271 Score = 141 bits (156), Expect = 9e-29 Identities = 154/202 (76%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCC 134575 |||||||||||||| ||||||||||| | ||| | | || ||| || | ||| || || Sbjct 76511 GTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTG-CCGTCTTCCAACTGCTTACC 76569 Query 134576 TGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTT 134635 ||||| ||||| | || || || || || || |||||||| |||||||| || ||| Sbjct 76570 AGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCTTTGTCTTGAATCTTGGATTT 76629 Query 134636 GACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGT 134695 ||| ||| | ||||| || || ||||| || | ||||||||||||||||| | || Sbjct 76630 GACATTGTCAATGGTGTCCGAGGACTCCACTTCCAAGGTAATGGTTTTACCGGTAAGGGT 76689 Query 134696 TTTAACGAAAATTTGCATTTTG 134717 ||| |||||||||||||| ||| Sbjct 76690 TTTGACGAAAATTTGCATCTTG 76711 >seq6 Length=1504906 Score = 138 bits (152), Expect = 1e-27 Identities = 164/220 (75%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| | || ||| || | ||| | ||||||||||||||||| |||||||| | | Sbjct 99697 CCACCTCTCAATCTCAAAACCAAGTGCAAGGTGGATTCCTTTTGAATATTGTAGTCAGAC 99638 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | || | || || | || || || ||||| ||||| | || ||||| || || Sbjct 99637 AAGGTTCTGCCA-TCTTCTAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGG 99579 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || |||||||| |||||||| || |||||| ||| | |||||||| ||||| || Sbjct 99578 GATACCTTCTTTGTCTTGAATCTTAGATTTGACATTGTCAATGGTGTCGGAAGATTCAAC 99519 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAA 134705 || | ||||| || ||||| || ||||||||||||||| Sbjct 99518 TTCCAAGGTAATAGTCTTACCAGTCAAAGTTTTAACGAAA 99479 >seq1 Length=3127730 Score = 134 bits (148), Expect = 1e-26 Identities = 150/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCC 134575 |||||||||||||||||||||||||| | ||| | | | | || || | ||||| || Sbjct 1885189 GTGGATTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTACCA-TCTTCTAATTGTTTACC 1885131 Query 134576 TGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTT 134635 ||||||||||| | || ||||| || || || ||||| || |||||||| ||| || Sbjct 1885130 AGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCCTTGTCTTGAATCTTTGACTT 1885071 Query 134636 GACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGT 134695 ||| ||| | ||||| || ||||| || || | ||| ||||| ||||| || || || Sbjct 1885070 GACGTTGTCAATAGTGTCAGAGGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAGGT 1885011 Query 134696 TTTAACGAAAATTTGCAT 134713 |||||||| |||||||| Sbjct 1885010 CTTAACGAAGATTTGCAT 1884993 Score = 129 bits (142), Expect = 6e-25 Identities = 152/203 (75%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCC 134575 ||||| |||||||||||||||||||| | ||| | | | | || || | ||||| || Sbjct 1884733 GTGGACTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTACCA-TCTTCTAATTGTTTACC 1884675 Query 134576 TGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTT 134635 ||||||||||| | || ||||| || || || ||||| || |||||||| ||| || Sbjct 1884674 AGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCCTTGTCTTGAATCTTTGACTT 1884615 Query 134636 GACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGT 134695 ||| ||| | ||||| || ||||| || || | ||| ||||| ||||| || || || Sbjct 1884614 GACGTTGTCAATAGTGTCAGAGGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAGGT 1884555 Query 134696 TTTAACGAAAATTTGCATTTTGT 134718 ||||| || ||||||||| ||| Sbjct 1884554 CTTAACAAAGATTTGCATTATGT 1884532 Score = 129 bits (142), Expect = 6e-25 Identities = 149/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCC 134575 ||||| |||||||||||||||||||| | ||| | | | | || || | ||||| || Sbjct 1884961 GTGGACTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTACCA-TCTTCTAATTGTTTACC 1884903 Query 134576 TGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTT 134635 ||||||||||| | || ||||| || || || ||||| || |||||||| ||| || Sbjct 1884902 AGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCCTTGTCTTGAATCTTTGACTT 1884843 Query 134636 GACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGT 134695 ||| ||| | ||||| || ||||| || || | ||| ||||| ||||| || || || Sbjct 1884842 GACGTTGTCAATAGTGTCAGAGGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAGGT 1884783 Query 134696 TTTAACGAAAATTTGCAT 134713 |||||||| |||||||| Sbjct 1884782 CTTAACGAAGATTTGCAT 1884765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398122030880