Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq5 232 5e-56 seq10 208 6e-49 >seq5 Length=1624186 Score = 232 bits (256), Expect = 5e-56 Identities = 595/892 (67%), Gaps = 37/892 (4%) Strand=Plus/Plus Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759 ||||| | ||||| || | || ||||| || ||||| ||||| ||||| ||| |||| Sbjct 609819 TTTGTGCTTTTTCCTATCAAGTACCATGAGATTTGGCAGATGTATAAAAAGGCAGAGGCA 609878 Query 43760 TCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCATTA 43819 || || ||||| || ||||| ||||||| ||||| || |||||| |||| Sbjct 609879 TCTTTCTGGACTGCCGAAGAGATTGATTTAGGAAAAGATATATATGATTGGA----ATTA 609934 Query 43820 AAACCACAAGAAA----AAC---ATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAG 43872 || | || | | | |||| ||||| ||||| |||||||||||||| || Sbjct 609935 CAAGCTTAACGATGGTGAGCGGTATTTCATATCCAGAGTTTTAGCGTTTTTTGCTGCCAG 609994 Query 43873 CGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGA 43932 ||||| || |||||||||||| | || ||| | ||| || ||| | || Sbjct 609995 TGACGGCATTGTCAATGAAAATCTAGTGCAAAACTTTTCTACAGAGGTGCAAGTGAGCGA 610054 Query 43933 AGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAG 43992 ||| ||| || ||||| |||||||| || ||||| || ||||| || | || Sbjct 610055 GGCAAAATGCTTCTATGGATTTCAAATAATGATGGAAAACATACATTCCGAGACCTATTC 610114 Query 43993 TCTTCTGATAGATACGTACATCAAAGATGGGCACGAGA-AGCATCGATTGTTTAATGCGA 44051 | || |||||||| || ||||||||| | | ||| || || ||||| ||||| | Sbjct 610115 CTTACTTATAGATACTTATATCAAAGATCAGAAAGAGGCAGAATTC-TTGTTCAATGCCA 610173 Query 44052 TAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCA- 44110 | ||||| |||| || ||| | ||||| |||||||| | ||||| || Sbjct 610174 TCGAAACTATACCGAGCATCAAAGAGAAAGCTGACTGGGCTTTACGTTGGATCAACGACG 610233 Query 44111 --AATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTT 44168 || | || |||| |||||| ||||| || ||||| | || ||||| || || || | Sbjct 610234 ACAACGCTTTGTTTGCAGAACGTCTTGTTGCCTTTGCTGCCGTAGAAGGAATATTTTTCT 610293 Query 44169 CAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGT 44228 ||||||||||||| | || |||||||| || ||| ||||| | ||||| || ||||||| Sbjct 610294 CAGGATCGTTTGCTTCAATCTTTTGGTTGAAAAAAAGAGGTCTCATGCCAGGTTTGACGT 610353 Query 44229 TTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTG-CT-TGTT 44286 |||| || ||||| || || | || |||||||| ||| |||||||| || || | | Sbjct 610354 TTTCTAACGAGTTGATTAGCAGGGACGAAGGCTTGCATACTGATTTTGCGTGTCTATTGT 610413 Query 44287 ACTTGGATATCTAGGAGACGATAAGCCTTCATGTAAGACAATTACAGATATTGTTGTAGA 44346 ||| || | | | || | | | | |||| || | | || | || Sbjct 610414 ACTCTCATTTGCA--AAACAAATTGGATAAA---AAGATTGTTGAAAAAATCATCACCGA 610468 Query 44347 GGCAGTAAAGATAGAACAAGA---ATTT--ATGACAACAGCATTACCTGTAAATTTAATA 44401 || || |||||| |||| |||| ||||| || | ||||| || || Sbjct 610469 AGCTGTTGCTATAGAA-AAGAAATATTTCGATGAC----GCTCTTTCTGTATCCTTGTTA 610523 Query 44402 GGAATGAATGAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTG 44461 |||||||||| ||| |||||||||||| | || | |||| || || || || | Sbjct 610524 GGAATGAATGCCACTTTAATGAACCAATATGTGGAGTTTGTTGCCGACCGGTT--GTTAG 610581 Query 44462 GAAC--TGGGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATA 44519 | | | ||| | ||||| |||| || | || || |||||||| |||||||| | Sbjct 610582 TATCCTTAGGTAACAATAAAGTATATAACGTGAACAATCCTTTTGATTTCATGGAAAACA 610641 Query 44520 TTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCA 44571 | || |||| ||| || || || ||||| || ||| | ||| ||| ||||| Sbjct 610642 TCTCCTTGGCAGGAAAGACGAATTTTTTCGAGAAAAGAGTTTCAGACTATCA 610693 >seq10 Length=744508 Score = 208 bits (230), Expect = 6e-49 Identities = 413/604 (68%), Gaps = 22/604 (4%) Strand=Plus/Minus Query 43697 AGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAG 43756 || ||||| || | || || | || ||||| || ||||| |||||||| || || | Sbjct 46509 AGATTTGTGTTGATGCCTATCAAGTACCATGAGATTTGGCAGATGTACAAGAAGGCCGAA 46450 Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCA 43816 ||||| || |||||||| || || |||||||| | || || || |||| || || | Sbjct 46449 GCGTCGTTCTGGACAGCCGAGGAGATTGATTTGTCCAAGGATTT-GCAC----GACTGGA 46395 Query 43817 TTAAAACCACAAGA---AAAACA-------TTTTATATCTTTGGTTTTGGCGTTTTTTGC 43866 | |||| || ||||| ||| || ||| |||||||||||||||||| Sbjct 46394 --ACAACCGGTTGACGGAAAACGAGCGGTTTTTCATTTCTCGGGTTTTGGCGTTTTTTGC 46337 Query 43867 TGCGAGCGACGGGATAGTCAATGAAAATTTGGTT-AGTCGGTTTGCGCAAGAAGTTCAAT 43925 |||| ||||| || ||||| || || ||||| || ||| || |||||||| Sbjct 46336 TGCGTCGGACGGAATTGTCAACGAGAACTTGGTGGAGAACTTTTCTGCC-GAAGTTCAGG 46278 Query 43926 TACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAA 43985 | ||||| || | ||| || ||||| || || || || ||||| |||||||||| Sbjct 46277 TCCCAGAGGCCAAGTTTTTCTACGGGTTCCAGATCATGATGGAGAATATCCATTCGGAAA 46218 Query 43986 TGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTA 44045 ||| || |||| || ||||| |||| || | ||| | ||||| | Sbjct 46217 CATACTCGCTATTGATTGACACGTATGTCAAGGACCCTAAGGAGTCTGAGTTTTTGTTCA 46158 Query 44046 ATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAA 44105 |||| || || ||| | || || || || || || ||||||||| | | |||||| | Sbjct 46157 ATGCCATTGAGACAATTCCACAAATCAAGCAAAAGGCCGACTGGGCCTTGAGATGGATCA 46098 Query 44106 ATT-CAA--ATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTT 44162 | | | | | | |||| ||| || | || || ||||| | ||| |||||||||| Sbjct 46097 ACGACGACCAGGCCTTGTTTGCTGAAAGATTGGTTGCCTTTGCTGCTGTTGAAGGCATTT 46038 Query 44163 TCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGT 44222 |||| || || || ||||| | || || ||||| || ||| ||||||||||||| || | Sbjct 46037 TCTTCTCGGGCTCTTTTGCTTCTATTTTCTGGTTGAAAAAAAGAGGTTTGATGCCGGGCT 45978 Query 44223 TGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCT 44282 |||||||||| || || || || | | || ||||| || || ||| |||||||||| Sbjct 45977 TGACGTTTTCTAACGAATTGATCTGCAGAGACGAAGGTTTGCACACCGACTTTGCTTGCT 45918 Query 44283 TGTT 44286 |||| Sbjct 45917 TGTT 45914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455786864220