Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq4 105 6e-18 seq1 89.7 4e-13 >seq4 Length=1632271 Score = 105 bits (116), Expect = 6e-18 Identities = 264/397 (66%), Gaps = 17/397 (4%) Strand=Plus/Minus Query 131548 TTCGTAATTTTCGTACAACGTTTCAAAGTTTTGGCCAAACGAACTGTC---CAAAT-TGG 131603 |||||| ||||| ||||| | |||||| | | ||| | | |||| |||| ||| Sbjct 1009094 TTCGTATTTTTCATACAAAGCTTCAAACTCCTCACCATAAG---TGTCAGCCAAACCTGG 1009038 Query 131604 GACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACA 131663 ||| |||| | ||| | | ||| ||||| | ||| | ||||| | ||||||||||| Sbjct 1009037 GAC-TTCGTTTGGAGAGAATAGGGACCAATCCTGGTTTTTCTCAACCCTCTTCATAAACA 1008979 Query 131664 AATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAA 131723 |||| | | ||| || || |||| ||||||||| | | |||||| |||| | Sbjct 1008978 AATCGGAAATCCACAAGGCTGGAAACAAGTCTCTAGCTCTGATTTCTTCTTTACCGTGAT 1008919 Query 131724 tttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCA 131783 ||||| | | || | ||| || || || || | |||||| || || | ||| | || | Sbjct 1008918 TTTTTCTGATATCAATAAAATCAAAGATATCTGAATGCCATGGCTCAACATAGATAGCGA 1008859 Query 131784 TTGCGCC------TTTGCGCTTACCGCCTTGATTAACATGACGAACCATGTTGTTGTATA 131837 || || |||| ||||| ||||||| ||||| | | | | |||||| | | Sbjct 1008858 AAGCACCAGGTCTTTTG---TTACCACCTTGATCAACATATCTAGCAGTATTGTTGAAAA 1008802 Query 131838 CGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCAT 131897 | | |||||| || | |||||||| | || ||||| | ||||| ||| Sbjct 1008801 CTCTCAACATTGGAATGATACCGTTGGAAGTACCGTTGGTACCAGCTATGTACGACCCAG 1008742 Query 131898 TGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCC 131934 |||||||||| |||| | || | |||||||| || Sbjct 1008741 TGGCTCTGATATTGTTGATGTGCAAACCAATACCACC 1008705 >seq1 Length=3127730 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || || || || || |||||||| |||||||| || | | | | ||||| Sbjct 1884745 ACCAAGTGCAAAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTACCATCTTCT 1884686 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 | |||||||| || |||| | | |||||||| || || | ||| || || || Sbjct 1884685 AATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCCTTGTCTTGA 1884626 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| || | | | || | |||||| | || ||||||||| | ||| || | || Sbjct 1884625 ATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCAACTTCCAAAGTGATGGTCTTA 1884566 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || |||| || || |||||||||||||| Sbjct 1884565 CCAGTCAAGGTCTTAACAAAGATTTGCAT 1884537 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || || || || || |||||||| |||||||| || | | | | ||||| Sbjct 1884973 ACCAAGTGCAAAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTACCATCTTCT 1884914 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 | |||||||| || |||| | | |||||||| || || | ||| || || || Sbjct 1884913 AATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCCTTGTCTTGA 1884854 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| || | | | || | |||||| | || ||||||||| | ||| || | || Sbjct 1884853 ATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCAACTTCCAAAGTGATGGTCTTA 1884794 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || |||| || || || |||||||||||| Sbjct 1884793 CCAGTCAAGGTCTTAACGAAGATTTGCATA 1884764 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || || || || || |||||||| |||||||| || | | | | ||||| Sbjct 1885201 ACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTACCATCTTCT 1885142 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 | |||||||| || |||| | | |||||||| || || | ||| || || || Sbjct 1885141 AATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCCTTGTCTTGA 1885082 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| || | | | || | |||||| | || ||||||||| | ||| || | || Sbjct 1885081 ATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCAACTTCCAAAGTGATGGTCTTA 1885022 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || |||| || || || |||||||||||| Sbjct 1885021 CCAGTCAAGGTCTTAACGAAGATTTGCATA 1884992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934172128928