Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq4 275 8e-69 seq2 96.9 4e-15 seq7 95.1 2e-14 >seq4 Length=1632271 Score = 275 bits (304), Expect = 8e-69 Identities = 1111/1726 (64%), Gaps = 43/1726 (2%) Strand=Plus/Minus Query 110369 TAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTG 110428 |||||||| |||||||| | || | |||||| |||| | ||||||||| | | |||| Sbjct 1010191 TAGTACATACCGGTCTTCAAACCCTTTTTCCAACCGTAGAAATGCATAGATGTCAACTTG 1010132 Query 110429 GACATCGTTGGACTTTCCATGAAGAG---GTTCAT--ACTTTGACTTTGGTCAATGAAGC 110483 ||| |||||| ||| ||| | | |||||| ||| || ||| ||||| || Sbjct 1010131 CCCATAGTTGGA---TCCTTGATGTGAATGTTCATGGACTGCGA--TTGATCAATAAATG 1010077 Query 110484 GCCCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTAATTTCCCAAACTGTGCGAT 110543 | | | | || |||| |||||| | | ||| ||||||||| || || || Sbjct 1010076 GAGCTCTGTCGGCAGCCAAATCAATAATCTTCTTTTGAGAAATTTCCCAGACAGTTTTAT 1010017 Query 110544 AGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCA 110603 | | || ||| | || | || | || || | ||||||| ||||| || | | Sbjct 1010016 ACAAATCCTTCAATTCTTGAGGAACATTTGGCAAGCTCTGGATAGAACCATTAGCACTAA 1009957 Query 110604 CCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGT 110663 | ||| |||| |||||| | ||||| | || || | | | || || | | || Sbjct 1009956 CAATGTGATCTTTCATAGAAGTAGACCACAATCCCATTTCCACCAAATCCTTCAACAAGT 1009897 Query 110664 GCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGT 110723 ||| || || ||||||||| || | |||||| || ||||| | |||| Sbjct 1009896 ATGGGTTCACTATTTGAAACTCACCGGCCAAAACTCTTCTGGAATAAATGTTAGAGGTGT 1009837 Query 110724 ATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTG 110783 ||||||| || ||||| || | |||||||||||| | |||||| || |||||||| || | Sbjct 1009836 ATGGTTCGAAACATTCGTTGTAACCCAAGATTTGAGAGGTGGAAGCAGTTGGCATAGGAG 1009777 Query 110784 CCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGT 110843 | | ||| | | ||| | | ||| | || ||| | || || ||| |||||||| Sbjct 1009776 CAACCAACAAAGAGTTTCTCAAACCGTGCTTCTTAACTTTTTGTTTAAGAGAATCCCAGT 1009717 Query 110844 ----CGTAGTTGA--GCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGG 110897 | | | || ||||| ||| |||| | |||| | | || ||||| | Sbjct 1009716 CCCACAAACTAGAAGGCTTG---ACAC---CCCATAAGTCATAAGACAACAAGCCTTGAG 1009663 Query 110898 ACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCG 110957 | || ||||| || || | || ||||||| || | | |||| |||||| | | Sbjct 1009662 AAGCTGGAGATCCTTCGTAAGTCTCATAGGTTCCATCAGTGGCAGCTAATTCAGTGGAAG 1009603 Query 110958 CCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCAT 111017 | || | | || ||||| ||||| |||||||| | || |||| ||||| ||||| Sbjct 1009602 CTTCAACAGCAGCATGATAGATGGTCTCAAAGATTTGGGCGTTCAATTCCTTAGCTTCTG 1009543 Query 111018 CTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAAC 111077 || ||||| | | | ||| || || || || | |||||||||||| | | Sbjct 1009542 GAGATTCAAAAGGCAATCTCAACATCATGAAGGTGTCAGCCAAACCTTGAACACCAACAG 1009483 Query 111078 CAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCT-CAACGGGATAAAAATTTCTG 111136 |||| |||||||||| | ||| || ||| || ||| ||| ||||||||||||||| Sbjct 1009482 CAATTGGTCTGTGTCTGAAATTGGATCTTCTGGC-CTCTGGAACAGGATAAAAATTTCTG 1009424 Query 111137 TCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAA 111196 ||||||| ||| | |||||||| | | ||| | || ||||| | || ||| | Sbjct 1009423 TCAATGATCTTGTTCAAGTTTTTGGTGATGACCTTGGCAATCTCATGCAACTTGTCAAAG 1009364 Query 111197 TCAAAAG----TGCG-AGTCTCTT-CATTGACATACTTTGGAAGGGCGATTGATGCCAAA 111250 | ||| || | |||| || | ||| | ||| | || | || ||||| Sbjct 1009363 TTGTAAGTCAATGAGTTGTCTGTTGTCTCAACAAAAGCTGGTAAAGCAACAGAAGCCAAG 1009304 Query 111251 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAA 111310 || |||||||| || || | ||| | || || | ||| || ||| |||||||| Sbjct 1009303 TTACAAACAGCAGTTTCGTTTGGATCAGAATATTCAACAATCTCACAACACAAGTTGGAC 1009244 Query 111311 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGC 111370 || || | || | ||||||||||||| || ||| || ||||||||||| | | Sbjct 1009243 GATTTGATTATACCGAGATTCTTTTGGTTAGATTTAGCGTTACAGGCATCCTTGTATAAC 1009184 Query 111371 ATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGC 111429 ||| | || || || || || || || | || | || | | ||| ||| | | || Sbjct 1009183 ATGAATGGAGTACCGGTTTCAGTTTGAGCTTCCAAGATGGAATACCACAACTTTTG-AGC 1009125 Query 111430 TGGTACAATGGCGTTGGCCCGTCCCTCCGC-CTCGTACTTTGTGTAGAGGGCTTCAAACT 111488 | || | | | || | | ||| | | ||||| ||| || | |||||||||| Sbjct 1009124 TTTAACTGT-TCTTCTGCTCTTACCTTCACGTTCGTATTTTTCATACAAAGCTTCAAACT 1009066 Query 111489 CCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGAC 111548 ||||||| | ||| | | |||||| | | || |||| |||| || ||||| | Sbjct 1009065 CCTCACCATAAGTGTCAGCCAAACCTGGGACTTCGTTTGGAGAGAATAGGGACCAATCCT 1009006 Query 111549 CACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTC 111608 || |||||||| |||||| || | || | |||||||| || || ||| | |||| Sbjct 1009005 GGTTTTTCTCAACCCTCTTCATAAACAAATCGGAAATCCACAAGGCTGGAAACAAGTCTC 1008946 Query 111609 TA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCC 111667 || | | || ||||| | ||| || || || | |||| || || | |||||| Sbjct 1008945 TAGCTCTGA-TTTCTTCTTTACCGTGATTTTTTCTGATATCAATAAAATCAAAGATATCT 1008887 Query 111668 GCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATT 111723 | ||||||||||||| ||||| |||| || || |||| | ||| |||||| Sbjct 1008886 GAATGCCATGGCTCAACATAGATAGCGAAAGCACCAGGTCTTTTG-TTACCACCTTGATC 1008828 Query 111724 TACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACC 111783 ||||| | || || ||| || || | | ||||||||| ||||| | || ||| Sbjct 1008827 AACATATCTAGCAGTATTGTTGAAAACTCTCAACATTGGAATGATACCGTTGGAAGTACC 1008768 Query 111784 ATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACC 111843 || || || || || | ||||||| | || | |||||||| |||||||| Sbjct 1008767 GTTGGTACCAGCTATGTACGACCCAGTGGCTCTGATATTGTTGATGTGCAAACCAATACC 1008708 Query 111844 CCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGA 111903 ||||| ||| ||| || | | | ||| || | || |||| || || Sbjct 1008707 ACCAGCATGCTTACTGATGATGGCCATTTGTTTCAATGTTTCAAAAATGCCGTCAATGGA 1008648 Query 111904 GTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATT 111963 ||| | || |||| | |||||| ||| |||||||| | |||| ||||||||||| Sbjct 1008647 GTCATTTTTCATGGCAACAAGGAAACAAGATGACATCTGGGCGTTTGGAGTACCAGCATT 1008588 Query 111964 GAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCA 112022 ||| | || || | || || |||| ||| | | |||||| || ||| || || | Sbjct 1008587 GAACAAAGTAGGAGAAGCATGGGTGAA-ATATTTGAGAGACATCAAGTTGTAAGTTTCAA 1008529 Query 112023 AGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCAT 112068 || ||||||||| || || || || || || || | ||| Sbjct 1008528 TAACTTTTGGAATGTCTTCACCATGAATACCAATAGCCACTCTCAT 1008483 >seq2 Length=1906241 Score = 96.9 bits (106), Expect = 4e-15 Identities = 164/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 11620 CTTGCCCACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGAT 11679 |||||| | || |||||||| || | || ||||| ||| ||| | ||| ||| | Sbjct 482261 CTTGCCAATGGCGTCAATCTCGTCTACAAACACAATGGCCGGTGCATTCTGGCGCGCGGT 482320 Query 11680 TTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGC 11739 || || |||||||| || | | || ||||| || |||||||| |||||||| | | Sbjct 482321 TTTGAAAAGATCGCGTACTCGTGACGCTCCCACGCCTACAAACATTTCCACAAATTCCGA 482380 Query 11740 GGCAGAGCACTGGAT-GAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGG 11798 | ||| || | || |||||| ||| || || || || | || ||| | | || Sbjct 482381 TCCGGAG-ACGGAATAGAATGGAACACCTGCCTCGCCAGCAGTTGCCTTGGCCAACAAGG 482439 Query 11799 TCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC 11853 | |||||||| || || || | ||||| |||||||| ||||||||||||||| Sbjct 482440 TTTTTCCCGTGCCCGGAGGCCCTGAGAGAATGGCGCCTCTGGGGATCTTGGCACC 482494 >seq7 Length=1100177 Score = 95.1 bits (104), Expect = 2e-14 Identities = 117/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 164603 GTATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGC 164662 |||||| | ||||| ||| ||||||| | ||||| |||||||||||| |||||| Sbjct 224679 GTATGGCAGAGTTGCTCCAAGATCCGGATTGGCTGTAAAGCATGGTATTTCCACTGGTGC 224620 Query 164663 GGGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGA 164722 |||||||||||| | || || | ||| |||||||| || ||| | ||||| || | Sbjct 224619 TGGTGTTATTGATGCTGATTACAGAGGCGAAGTCAAGGTTGTTTTGTTCAACCATTCTAA 224560 Query 164723 CAAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAA 164762 ||||| ||||| || || |||| || | || || ||| Sbjct 224559 AAAAGATTTTGAAGTCAAACAAGGCGACAGAATTGCCCAA 224520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031654582400