Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq10 100 3e-16 >seq10 Length=744508 Score = 100 bits (110), Expect = 3e-16 Identities = 330/509 (65%), Gaps = 12/509 (2%) Strand=Plus/Minus Query 59613 TCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACCTGAAGGATTGGGACAAGC-- 59670 || |||||| | | |||||||||||| | || || || | || ||| |||| | Sbjct 46446 TCGTTCTGGACAGCCGAGGAGATTGATTTGTCCAAGGATTTGCACGACTGGAACAACCGG 46387 Query 59671 -TCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCTTCTTCGCGGCGAGTGAT 59729 | | | |||||| | |||||| ||| |||| || || || ||| || Sbjct 46386 TTGACGGAAAACGAGCGGTTTTTCATTTCTCGGGTTTTGGCGTTTTTTGCTGCGTCGGAC 46327 Query 59730 GGAATTGTGATGGAAAATATAGACATGAACTTTTCCAAGGATGTCCAGATTGCCGAGGCC 59789 |||||||| | || || | | ||||||||| || || ||| | | |||||| Sbjct 46326 GGAATTGTCAACGAGAACTTGGTGGAGAACTTTTCTGCCGAAGTTCAGGTCCCAGAGGCC 46267 Query 59790 CGGTCGTTCTACGCGTATCAGTCGTTCAACGAGTCTATCCACTCCGAGACGTACTCGCTC 59849 || ||||||| || ||| | | ||| |||||| || || || |||||||| Sbjct 46266 AAGTTTTTCTACGGGTTCCAGATCATGATGGAGAATATCCATTCGGAAACATACTCGCTA 46207 Query 59850 ATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGCTGGTCTGTTCCGTGCCATAGAG 59909 |||| || | || |||||||| || | ||| | | ||||| |||||| ||| Sbjct 46206 TTGATTGACACGTATGTCAAGGACCCTAAGGAGTCTGAGTTTTTGTTCAATGCCATTGAG 46147 Query 59910 ACGTCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAGTGGATGA-----GTCCTG 59964 || || | | || ||||| || || |||||| || ||||| | | || | Sbjct 46146 ACAATTCCACAAATCAAGCAAAAGGCCGACTGGGCCTTGAGATGGATCAACGACGACCAG 46087 Query 59965 GAGCATCATTTGCACAACGTCTCATAGCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCT 60023 | | | ||||| || | | | || ||||| ||| || ||||| || |||||||| Sbjct 46086 G--CCTTGTTTGCTGAAAGATTGGTTGCCTTTGC-TGCTGTTGAAGGCATTTTCTTCTCG 46030 Query 60024 GGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTC 60083 ||||| || | ||||||||||| | ||||| | || | ||||||||| ||| || Sbjct 46029 GGCTCTTTTGCTTCTATTTTCTGGTTGAAAAAAAGAGGTTTGATGCCGGGCTTGACGTTT 45970 Query 60084 TCCAACGAGCTGATTTCCCGGGACGAGGG 60112 || ||||| |||| | | | ||||| || Sbjct 45969 TCTAACGAATTGATCTGCAGAGACGAAGG 45941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524498311360