Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq10 127 2e-24 seq5 89.7 6e-13 >seq10 Length=744508 Score = 127 bits (140), Expect = 2e-24 Identities = 366/561 (65%), Gaps = 8/561 (1%) Strand=Plus/Plus Query 74763 TGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCA 74822 ||| | ||||| ||||||| |||||||| || ||||||| | ||| ||||| | || Sbjct 45935 TGCAAACCTTCGTCTCTGCAGATCAATTCGTTAGAAAACGTCAAGCCCGGCATCAAACCT 45994 Query 74823 CGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACAC 74882 | || |||||||| || || | | || || || |||||| |||||||| ||| Sbjct 45995 CTTTTTTTCAACCAGAAAATAGAAGCAAAAGAGCCCGAGAAGAAAATGCCTTCAACAGCA 46054 Query 74883 GCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC----ATCCAAGTCTGAGC 74938 |||||||| || | | || || ||| || | || ||| ||||| || || Sbjct 46055 GCAAAGGCAACCAATCTTTCAGCAAACAAGGCCT-GGTCGTCGTTGATCCATCTCAAGGC 46113 Query 74939 CCATTCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTT 74998 ||| || || ||| | |||| || | || || || || | ||| | | Sbjct 46114 CCAGTCGGCCTTTTGCTTGATTTGTGGAATTGTCTCAATGGCATTGAACAAAAACTCAGA 46173 Query 74999 CTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGA 75058 ||| | || |||||||| | ||||||||| || ||||| || |||||||| || Sbjct 46174 CTCCTTAGGGTCCTTGACATACGTGTCAATCAATAGCGAGTATGTTTCCGAATGGATATT 46233 Query 75059 CTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGA 75118 ||| | | |||| || |||||||| || ||||||| | ||| || || || Sbjct 46234 CTCCATCATGATCTGGAACCCGTAGAAAAACTTGGCCTCTGGGACCTGAACTTCGGCAGA 46293 Query 75119 AAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTAC 75178 ||| ||| | | ||||| |||| || |||||||| || || ||||| |||| || Sbjct 46294 AAAGTTCTCCACCAAGTTCTCGTTGACAATTCCGTCCGACGCAGCAAAAAACGCCAAAAC 46353 Query 75179 CATTTTGATAAAGTGGCGCTCATCGTCAGTGA---GTTTGTCCCAATCCTTCAGGTCCCC 75235 | || || ||||| | || || | | |||| ||| || | || ||| Sbjct 46354 CCGAGAAATGAAAAACCGCTCGTTTTCCGTCAACCGGTTGTTCCAGTCGTGCAAATCCTT 46413 Query 75236 CGCCAAATCAATCTCCTCGACCGTCCAGAAACTCCCAATCGCCTTTTTGTACAAAGACCA 75295 | |||||||||||||||| | |||||||| | | ||||| ||||||| ||| Sbjct 46414 GGACAAATCAATCTCCTCGGCTGTCCAGAACGACGCTTCGGCCTTCTTGTACATCTGCCA 46473 Query 75296 CAAGTCAGGGTAATTGATTGG 75316 | ||| |||| ||||| || Sbjct 46474 AATCTCATGGTACTTGATAGG 46494 >seq5 Length=1624186 Score = 89.7 bits (98), Expect = 6e-13 Identities = 128/178 (72%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 74733 TGAGAGTA-AAGCGTCACGGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTC 74791 |||||||| || | |||| |||| || |||| ||||||| || ||||| ||||| || Sbjct 610420 TGAGAGTACAATAGACACG-CAAAATCAGTATGCAAGCCTTCGTCCCTGCTAATCAACTC 610362 Query 74792 ATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAA 74851 || ||||||| | || ||||| || || | || |||||||||||||| | | || Sbjct 610361 GTTAGAAAACGTCAAACCTGGCATGAGACCTCTTTTTTTCAACCAAAAGATTGAAGCAAA 610302 Query 74852 GGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAAC 74909 || || ||| || || ||||| || |||||||| ||||| |||| || ||| Sbjct 610301 CGATCCTGAGAAAAATATTCCTTCTACGGCAGCAAAGGCAACAAGACGTTCTGCAAAC 610244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215699031200