Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq4 107 1e-18 seq1 96.9 2e-15 >seq4 Length=1632271 Score = 107 bits (118), Expect = 1e-18 Identities = 158/220 (72%), Gaps = 3/220 (1%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| || | |||| |||||||| ||||| || || || | |||| ||||||| Sbjct 76499 ACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCGTCTTCC 76558 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 | || ||||| ||||| || || | |||||||| || || | || || |||||| Sbjct 76559 AACTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCTTTGTCTTGA 76618 Query 34618 ATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 ||||| | ||| || | ||| ||||| | ||||||||||| ||| || ||||| Sbjct 76619 ATCTTG-GATTTGACATTGTCAATGGTGTCCGAGGACTCCACTTCCAAGGTAATGGTTTT 76677 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCATGTTGA-TTGT 34715 |||||| | ||||| || ||||| ||||| |||| |||| Sbjct 76678 ACCGGTAAGGGTTTTGACGAAAATTTGCATCTTGACTTGT 76717 >seq1 Length=3127730 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| || | |||| ||||||||||||||| || || || | |||| | ||||| Sbjct 1884745 ACCAAGTGCAAAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTACCATCTTCT 1884686 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 | ||||||||| ||||| || || | ||||| || || || | || ||||||||| || Sbjct 1884685 AATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCCTTGTCT-TG 1884627 Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 | |||| || ||| | ||| ||||| | || ||||||| || || || || Sbjct 1884626 AATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCAACTTCCAAAGTGATGGTCTT 1884567 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| || || || || ||||| || ||||| Sbjct 1884566 ACCAGTCAAGGTCTTAACAAAGATTTGCAT 1884537 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| || | |||| ||||||||||||||| || || || | |||| | ||||| Sbjct 1884973 ACCAAGTGCAAAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTACCATCTTCT 1884914 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 | ||||||||| ||||| || || | ||||| || || || | || ||||||||| || Sbjct 1884913 AATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCCTTGTCT-TG 1884855 Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 | |||| || ||| | ||| ||||| | || ||||||| || || || || Sbjct 1884854 AATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCAACTTCCAAAGTGATGGTCTT 1884795 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| || || || || || || || ||||| Sbjct 1884794 ACCAGTCAAGGTCTTAACGAAGATTTGCAT 1884765 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| || | |||| |||||||||||||| || || || | |||| | ||||| Sbjct 1885201 ACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTACCATCTTCT 1885142 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 | ||||||||| ||||| || || | ||||| || || || | || ||||||||| || Sbjct 1885141 AATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCCTTGTCT-TG 1885083 Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 | |||| || ||| | ||| ||||| | || ||||||| || || || || Sbjct 1885082 AATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCAACTTCCAAAGTGATGGTCTT 1885023 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| || || || || || || || ||||| Sbjct 1885022 ACCAGTCAAGGTCTTAACGAAGATTTGCAT 1884993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729431226252