Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03-
01] 44 sequences; 16,719,687 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq4 131 1e-25
seq1 125 5e-24
seq6 102 6e-17
>seq4
Length=1632271
Score = 131 bits (144), Expect = 1e-25
Identities = 169/231 (73%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| ||||| |||||||| |||||||| || || ||||| || || | ||||| || |||
Sbjct 76710 AAGATGCAAATTTTCGTCAAAACCCTTACCGGTAAAACCATTACCTTGGAAGTGGAGTCC 76651
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
||||||| |||| ||| | ||| | || | || |||||||||||| | || |||||
Sbjct 76650 TCGGACACCATTGACAATGTCAAATCCAAGA-TTCAAGACAAAGAAGGTATTCCACCAGA 76592
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
||||| | || || ||||| || || || ||||||||| | || || ||| ||
Sbjct 76591 CCAACAAAGATTGATCTTTGCTGGTAAGCAGTTGGAAGACGGCAGAACCTTGTCCGACTA 76532
Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|||||| ||||| || ||||| || || || || | || ||| |||| ||
Sbjct 76531 CAACATCCAAAAGGAATCCACTTTGCACTTGGTCCTCAGATTGAGAGGTGG 76481
>seq1
Length=3127730
Score = 125 bits (138), Expect = 5e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || |||||||| ||| | || || || || |||||| | |||||||| ||| |
Sbjct 1884765 ATGCAAATCTTCGTTAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCCTCT 1884824
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|||||| |||| | | || ||| ||| ||||| |||||| | || |||||||||
Sbjct 1884825 GACACTATTGACAACGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCAGATCAA 1884884
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|| | || || ||||| || |||||| | ||||| | | || || || ||||||
Sbjct 1884885 CAAAGATTGATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACCTTGTCTGACTACAAC 1884944
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|| ||||| |||||||| || || || || | || ||| |||| ||
Sbjct 1884945 ATTCAAAAGGAGTCCACTTTGCACTTGGTCCTTAGATTGAGAGGTGG 1884991
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||| || || ||||| ||| | || || || || |||||| | |||||||| ||| |
Sbjct 1884536 AATGCAAATCTTTGTTAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCCTC 1884595
Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|||||| |||| | | || ||| ||| ||||| |||||| | || ||||||||
Sbjct 1884596 TGACACTATTGACAACGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCAGATCA 1884655
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || ||||| || |||||| | ||||| | | || || || |||||
Sbjct 1884656 ACAAAGATTGATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACCTTGTCTGACTACAA 1884715
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||| ||||| |||||||| || || || || | || ||| |||| ||
Sbjct 1884716 CATTCAAAAGGAGTCCACTTTGCACTTGGTCCTTAGATTGAGAGGTGG 1884763
Score = 122 bits (134), Expect = 6e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || |||||||| ||| | || || || || |||||| | |||||||| ||| |
Sbjct 1884993 ATGCAAATCTTCGTTAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCCTCT 1885052
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|||||| |||| | | || ||| ||| ||||| |||||| | || |||||||||
Sbjct 1885053 GACACTATTGACAACGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCAGATCAA 1885112
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|| | || || ||||| || |||||| | ||||| | | || || || ||||||
Sbjct 1885113 CAAAGATTGATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACCTTGTCTGACTACAAC 1885172
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|| ||||| || ||||| || || || || | || ||| |||| ||
Sbjct 1885173 ATTCAAAAGGAATCCACTTTGCACTTGGTCCTTAGATTGAGAGGTGG 1885219
>seq6
Length=1504906
Score = 102 bits (112), Expect = 6e-17
Identities = 156/220 (71%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 23619 TTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGT 23678
|||||||||||| | || || || || || || | |||||||| || | ||||| |
Sbjct 99479 TTTCGTTAAAACTTTGACTGGTAAGACTATTACCTTGGAAGTTGAATCTTCCGACACCAT 99538
Query 23679 TGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTT 23737
||| ||| | ||| | || ||| |||||||||||| | || || |||||||| | |
Sbjct 99539 TGACAATGTCAAATC-TAAGATTCAAGACAAAGAAGGTATCCCACCTGATCAACAAAGAT 99597
Query 23738 TAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAA 23797
| || ||||| || || ||| | ||||| | | || || || ||||| || ||||
Sbjct 99598 TGATCTTTGCTGGTAAGCAATTAGAAGATGGCAGAACCTTGTCTGACTACAATATTCAAA 99657
Query 23798 AAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
| || ||||| || || || ||||| || ||| |||| ||
Sbjct 99658 AGGAATCCACCTTGCACTTGGTTTTGAGATTGAGAGGTGG 99697
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338009418742352
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |