Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq4 161 2e-34 seq1 159 8e-34 seq6 149 1e-30 >seq4 Length=1632271 Score = 161 bits (178), Expect = 2e-34 Identities = 167/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| ||||| | ||| | ||||||||| ||||||| ||||| |||| ||| ||||| || Sbjct 76492 TCTGAGGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCC 76551 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||||| | |||||| ||||| ||||| | || ||||||||| || ||||||||||| || Sbjct 76552 GTCTTCCAACTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCTTT 76611 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||| ||||| || ||| || |||||||| |||| ||||| || || || || Sbjct 76612 GTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCCGAGGACTCCACTTCCAAGGTAAT 76671 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || || || || | ||||| | ||| | |||||| || Sbjct 76672 GGTTTTACCGGTAAGGGTTTTGACGAAAATTTGCATCTT 76710 >seq1 Length=3127730 Score = 159 bits (176), Expect = 8e-34 Identities = 165/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| ||||| | ||| | ||||||||| ||||| | ||||| || | ||| ||||| || Sbjct 1885208 TCTAAGGACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 1885149 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||||| || || ||||| || || | || |||||| || || |||||||||||||| Sbjct 1885148 ATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCCTT 1885089 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||| |||||| ||| || || || ||||| |||| ||| || || || ||||| Sbjct 1885088 GTCTTGAATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCAACTTCCAAAGTGAT 1885029 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || ||||| || || | ||| | |||||| Sbjct 1885028 GGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 1884993 Score = 156 bits (172), Expect = 1e-32 Identities = 164/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| ||||| | ||| | |||||| || ||||| | ||||| || | ||| ||||| || Sbjct 1884980 TCTAAGGACCAAGTGCAAAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 1884921 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||||| || || ||||| || || | || |||||| || || |||||||||||||| Sbjct 1884920 ATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCCTT 1884861 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||| |||||| ||| || || || ||||| |||| ||| || || || ||||| Sbjct 1884860 GTCTTGAATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCAACTTCCAAAGTGAT 1884801 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || ||||| || || | ||| | |||||| Sbjct 1884800 GGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 1884765 Score = 152 bits (168), Expect = 1e-31 Identities = 164/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| ||||| | ||| | |||||| || ||||| | ||||| || | ||| ||||| || Sbjct 1884752 TCTAAGGACCAAGTGCAAAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 1884693 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||||| || || ||||| || || | || |||||| || || |||||||||||||| Sbjct 1884692 ATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCCTT 1884633 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||| |||||| ||| || || || ||||| |||| ||| || || || ||||| Sbjct 1884632 GTCTTGAATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCAACTTCCAAAGTGAT 1884573 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||||| || ||||| || || | || | ||||||| Sbjct 1884572 GGTCTTACCAGTCAAGGTCTTAACAAAGATTTGCATT 1884536 >seq6 Length=1504906 Score = 149 bits (164), Expect = 1e-30 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| || | ||| | |||||||| ||||| | |||||| || | ||| ||||| || Sbjct 99686 TCTCAAAACCAAGTGCAAGGTGGATTCCTTTTGAATATTGTAGTCAGACAAGGTTCTGCC 99627 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||||| ||||| ||||| ||||| | || |||||| || || || |||||||| || Sbjct 99626 ATCTTCTAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGGATACCTTCTTT 99567 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||| ||||| || ||| || |||||||| || | ||| || || || || || Sbjct 99566 GTCTTGAATCTTAGATTTGACATTGTCAATGGTGTCGGAAGATTCAACTTCCAAGGTAAT 99507 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAA 225704 ||||| || ||||||||||| | ||| Sbjct 99506 AGTCTTACCAGTCAAAGTTTTAACGAA 99480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192530527710536