Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03-
01] 44 sequences; 16,719,687 total letters
Query= NC_030240.1
Length=128058
Score E
Sequences producing significant alignments: (Bits) Value
seq4 116 3e-21
seq6 107 2e-18
seq1 100 2e-16
>seq4
Length=1632271
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071
|| |||| |||||| | |||| ||||||||| ||||| ||||| || ||||| |||| |
Sbjct 76481 CCACCTCTCAATCTGAGGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 76540
Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131
| ||| || |||||||| || || || ||| | || | |||||||||||| ||
Sbjct 76541 AAGGTTCTGCCGTCTTCCAACTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGA 76600
Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTT 101191
| ||||||||||| ||| || ||| |||| | | | || || | |||| |
Sbjct 76601 ATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCCGAGGACTCCACT 76660
Query 101192 TCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238
|| | |||||| ||||| || || | ||||| | |||||||||||
Sbjct 76661 TCCAAGGTAATGGTTTTACCGGTAAGGGTTTTGACGAAAATTTGCAT 76707
>seq6
Length=1504906
Score = 107 bits (118), Expect = 2e-18
Identities = 152/214 (71%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071
|| |||| |||||| || |||| |||||| || ||||| |||||||||||||| || | |
Sbjct 99697 CCACCTCTCAATCTCAAAACCAAGTGCAAGGTGGATTCCTTTTGAATATTGTAGTCAGAC 99638
Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131
| ||| || |||||| ||||| || || ||| | || | |||||||| || ||
Sbjct 99637 AAGGTTCTGCCATCTTCTAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGG 99578
Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTT 101191
| ||||||||||| ||| || ||| |||| | | | || || | || |
Sbjct 99577 ATACCTTCTTTGTCTTGAATCTTAGATTTGACATTGTCAATGGTGTCGGAAGATTCAACT 99518
Query 101192 TCGACGGTAATAGTTTTGCCCGTCAATGTTTTAA 101225
|| | ||||||||| || || ||||| |||||||
Sbjct 99517 TCCAAGGTAATAGTCTTACCAGTCAAAGTTTTAA 99484
>seq1
Length=3127730
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071
|| |||| |||||| | |||| ||||||||| || || |||||||| ||||| || | |
Sbjct 1884763 CCACCTCTCAATCTAAGGACCAAGTGCAAAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 1884704
Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131
| ||| | |||||| |||||||| || ||| | || | |||||||| ||| ||
Sbjct 1884703 AAGGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGA 1884644
Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTT 101191
| ||||| ||||| ||| ||| || || | | | | || || | ||| |
Sbjct 1884643 ATACCTTCCTTGTCTTGAATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCAACT 1884584
Query 101192 TCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCATTAT 101241
|| | || || || || || ||||| || |||| ||| |||||||||||
Sbjct 1884583 TCCAAAGTGATGGTCTTACCAGTCAAGGTCTTAACAAAGATTTGCATTAT 1884534
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 409660580319396
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |