Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq5 334 6e-87 seq10 318 5e-82 >seq5 Length=1624186 Score = 334 bits (370), Expect = 6e-87 Identities = 612/887 (69%), Gaps = 17/887 (2%) Strand=Plus/Minus Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316 ||||| || || || |||| || ||||| ||||| || || ||| | || || || ||| Sbjct 610696 TTTTGATAGTCTGAAACTCTTTTCTCGAAAAAATTCGTCTTTCCTGCCAAGGAGATGTTT 610637 Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTT-TTCACACTTTAGAGCTACAAG 4375 ||||| |||||||| ||||| | |||| || ||| || || | || | ||| | Sbjct 610636 TCCATGAAATCAAAAGGATTGTTCACGTTATATACTTTATTGTTACCTAAG-GATACTAA 610578 Query 4376 CAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGT-TCGCAGTTAATTCCAATTA 4434 ||| ||||| || ||||| || | ||| ||| |||| | | ||| || ||||| | | Sbjct 610577 CAACCGGTCGGCAACAAACTCCACATATTGGTTCATTAAAGTGGCA-TTCATTCCTAACA 610519 Query 4435 ATCTCACAGGTAGCGCGT-ATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATT 4493 | |||| || |||| || || | |||| |||||||| || ||||| ||||| Sbjct 610518 AGGATACAGAAAGAGCGTCATCGAAATATTTCTT-TTCTATAGCAACAGCTTCGGTGATG 610460 Query 4494 ATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCA 4553 || | || | | | |||| ||| ||| || | |||||| ||||||| Sbjct 610459 ATTTTTTCAACAATCTTTTTATCCAATTTGTTTTGCAAATGAGAGTACAATAGACACGCA 610400 Query 4554 AAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGC 4613 |||||| |||||| |||||||| |||||||||| |||||||||||||| || || ||| Sbjct 610399 AAATCAGTATGCAAGCCTTCGTCCCTGCTAATCAACTCGTTAGAAAACGTCAAACCTGGC 610340 Query 4614 ATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCT 4673 || | |||||| ||||| | |||||| || | ||||| || || || || ||||| ||| Sbjct 610339 ATGAGACCTCTTTTTTTCAACCAAAAGATTGAAGCAAACGATCCTGAGAAAAATATTCCT 610280 Query 4674 TCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCAT 4733 |||||||| ||||| || || | || | ||| | | | ||| || ||||| Sbjct 610279 TCTACGGCAGCAAAGGCAACAAGACGTTCTGCAAACAAAGCGTTGTCGTCGTTGATCCAA 610220 Query 4734 TTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAA- 4792 ||| ||||||| |||||| | || | || ||| || || | || || || || || Sbjct 610219 CGTAAAGCCCAGTCAGCTTTCTCTTTGATGCTCGGTATAGTTTCGATGGCATTGAACAAG 610160 Query 4793 ---TTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTC 4849 | | | | |||| | |||| |||||||| ||||| |||| | ||| | || Sbjct 610159 AATTCTGCCTCTTTC----TGATCTTTGATATAAGTATCTATAAGTAAGGAATAGGTCTC 610104 Query 4850 AGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTG 4909 |||||||| ||||| || || |||||||| || |||||| | || || | ||||| Sbjct 610103 GGAATGTATGTTTTCCATCATTATTTGAAATCCATAGAAGCATTTTGCCTCGCTCACTTG 610044 Query 4910 AACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAA 4969 || || || |||| ||| |||| ||||| || || || ||||||||||| ||||| Sbjct 610043 CACCTCTGTAGAAAAGTTTTGCACTAGATTTTCATTGACAATGCCGTCACTGGCAGCAAA 609984 Query 4970 AAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTT---TTTCCAGTG 5026 |||||| ||||| ||||| || ||| | || || ||||| || ||||| | Sbjct 609983 AAACGCTAAAACTCTGGATATGAAATACCGCTCACCATCGTTAAGCTTGTAATTCCAATC 609924 Query 5027 GGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTT 5086 | |||||| |||||||| ||||| ||||||| || || || || || ||||| Sbjct 609923 ATATATATCTTTTCCTAAATCAATCTCTTCGGCAGTCCAGAAAGATGCCTCTGCCTTTTT 609864 Query 5087 GTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATC 5133 ||||| |||||| ||| | |||| || |||| | ||||||| Sbjct 609863 ATACATCTGCCAAATCTCATGGTACTTGATAGGAAAAAGCACAAATC 609817 >seq10 Length=744508 Score = 318 bits (352), Expect = 5e-82 Identities = 608/888 (68%), Gaps = 17/888 (2%) Strand=Plus/Plus Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316 ||||| || || || |||| |||||||| || || ||||| || | || ||||| ||| Sbjct 45629 TTTTGATAATCAGAGACTCTTTTTTCGAAAAAGTTGGTTTTTCCGGCCAAGGAAATGTTT 45688 Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAA----TGTTTTTCACACTTTAGAGCTAC 4372 |||||||||||||| ||||| || |||||||| |||| || || || || || Sbjct 45689 TCCATAAAATCAAATGGATTGGTAACGTTGTAAACCTTGTTGTT---ACCCAAG-GCGAC 45744 Query 4373 AAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAAT 4432 | ||||| ||| || ||||| | || || | ||| | || |||||| || || | Sbjct 45745 CAACAATCTGTCGGCGCAGAATTCCACGTATTGACACATCAATTTGCAGTTCATGCCCAA 45804 Query 4433 TAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGAT 4492 || || || | |||| || || | |||| ||| || | || ||||| ||||| Sbjct 45805 CAAGGAAACTGGCAAGGCGTCGGTAAAGTAGTCTTTTTCAATGTTGACAGCTTCGGTGAT 45864 Query 4493 TATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGC 4552 || | | | | || |||||| || |||| |||||| || || || Sbjct 45865 GATTTTCTCGACAATTTCCGGGTCTGGTTTGTTCTGCAAGTGAGAAAACAACAAGCAAGC 45924 Query 4553 AAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGG 4612 ||| || ||||||||||||||||||| |||| ||||||||||||||| || || || Sbjct 45925 AAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAATTCGTTAGAAAACGTCAAGCCCGG 45984 Query 4613 CATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCC 4672 ||| |||||||| ||||| | ||| || |||| ||||| || || || ||||| ||||| Sbjct 45985 CATCAAACCTCTTTTTTTCAACCAGAAAATAGAAGCAAAAGAGCCCGAGAAGAAAATGCC 46044 Query 4673 TTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAG--CTGGCTTTGTCTTTAATC 4730 ||| || || ||||| || || |||| | ||| || |||| | ||| || ||| Sbjct 46045 TTCAACAGCAGCAAAGGCAACCAATCTTTCAGCAAACAAGGCCTGG--TCGTCGTTGATC 46102 Query 4731 CATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAAT 4790 ||| | || ||||||| || |||| ||| | |||||||| | || || || || Sbjct 46103 CATCTCAAGGCCCAGTCGGCCTTTTGCTTGATTTGTGGAATTGTCTCAATGGCATTGAAC 46162 Query 4791 AATTTACT-TTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTC 4849 || ||| || ||||| | | ||| ||||| || | ||| || |||| Sbjct 46163 AA-AAACTCAGACTCCTTAGGGTCCTTGACATACGTGTCAATCAATAGCGAGTATGTTTC 46221 Query 4850 AGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTG 4909 ||||| ||||| || || ||||| || ||||| || | | || |||| || || Sbjct 46222 CGAATGGATATTCTCCATCATGATCTGGAACCCGTAGAAAAACTTGGCCTCTGGGACCTG 46281 Query 4910 AACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAA 4969 ||||||| | |||| | || || ||||| ||||| || || ||||| || ||||| Sbjct 46282 AACTTCGGCAGAAAAGTTCTCCACCAAGTTCTCGTTGACAATTCCGTCCGACGCAGCAAA 46341 Query 4970 AAACGCCAAAACATGAGATATAAAGTACTGTTCG---TCAGGCTTAAGTTTTTTCCAGTG 5026 |||||||||||| |||| || || || | ||| || | | | || ||||||| Sbjct 46342 AAACGCCAAAACCCGAGAAATGAAAAACCGCTCGTTTTCCGTCAACCGGTTGTTCCAGTC 46401 Query 5027 GGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTT 5086 | ||||||| || | ||||||| || || | ||||| ||||||||||| || || || Sbjct 46402 GTGCAAATCCTTGGACAAATCAATCTCCTCGGCTGTCCAGAACGACGCTTCGGCCTTCTT 46461 Query 5087 GTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCT 5134 |||||| |||||| ||| | |||| || || | | |||||||| Sbjct 46462 GTACATCTGCCAAATCTCATGGTACTTGATAGGCATCAACACAAATCT 46509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049370994652