Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03-
01] 44 sequences; 16,719,687 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq5 334 6e-87
seq10 318 5e-82
>seq5
Length=1624186
Score = 334 bits (370), Expect = 6e-87
Identities = 612/887 (69%), Gaps = 17/887 (2%)
Strand=Plus/Minus
Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316
||||| || || || |||| || ||||| ||||| || || ||| | || || || |||
Sbjct 610696 TTTTGATAGTCTGAAACTCTTTTCTCGAAAAAATTCGTCTTTCCTGCCAAGGAGATGTTT 610637
Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTT-TTCACACTTTAGAGCTACAAG 4375
||||| |||||||| ||||| | |||| || ||| || || | || | ||| |
Sbjct 610636 TCCATGAAATCAAAAGGATTGTTCACGTTATATACTTTATTGTTACCTAAG-GATACTAA 610578
Query 4376 CAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGT-TCGCAGTTAATTCCAATTA 4434
||| ||||| || ||||| || | ||| ||| |||| | | ||| || ||||| | |
Sbjct 610577 CAACCGGTCGGCAACAAACTCCACATATTGGTTCATTAAAGTGGCA-TTCATTCCTAACA 610519
Query 4435 ATCTCACAGGTAGCGCGT-ATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATT 4493
| |||| || |||| || || | |||| |||||||| || ||||| |||||
Sbjct 610518 AGGATACAGAAAGAGCGTCATCGAAATATTTCTT-TTCTATAGCAACAGCTTCGGTGATG 610460
Query 4494 ATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCA 4553
|| | || | | | |||| ||| ||| || | |||||| |||||||
Sbjct 610459 ATTTTTTCAACAATCTTTTTATCCAATTTGTTTTGCAAATGAGAGTACAATAGACACGCA 610400
Query 4554 AAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGC 4613
|||||| |||||| |||||||| |||||||||| |||||||||||||| || || |||
Sbjct 610399 AAATCAGTATGCAAGCCTTCGTCCCTGCTAATCAACTCGTTAGAAAACGTCAAACCTGGC 610340
Query 4614 ATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCT 4673
|| | |||||| ||||| | |||||| || | ||||| || || || || ||||| |||
Sbjct 610339 ATGAGACCTCTTTTTTTCAACCAAAAGATTGAAGCAAACGATCCTGAGAAAAATATTCCT 610280
Query 4674 TCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCAT 4733
|||||||| ||||| || || | || | ||| | | | ||| || |||||
Sbjct 610279 TCTACGGCAGCAAAGGCAACAAGACGTTCTGCAAACAAAGCGTTGTCGTCGTTGATCCAA 610220
Query 4734 TTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAA- 4792
||| ||||||| |||||| | || | || ||| || || | || || || || ||
Sbjct 610219 CGTAAAGCCCAGTCAGCTTTCTCTTTGATGCTCGGTATAGTTTCGATGGCATTGAACAAG 610160
Query 4793 ---TTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTC 4849
| | | | |||| | |||| |||||||| ||||| |||| | ||| | ||
Sbjct 610159 AATTCTGCCTCTTTC----TGATCTTTGATATAAGTATCTATAAGTAAGGAATAGGTCTC 610104
Query 4850 AGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTG 4909
|||||||| ||||| || || |||||||| || |||||| | || || | |||||
Sbjct 610103 GGAATGTATGTTTTCCATCATTATTTGAAATCCATAGAAGCATTTTGCCTCGCTCACTTG 610044
Query 4910 AACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAA 4969
|| || || |||| ||| |||| ||||| || || || ||||||||||| |||||
Sbjct 610043 CACCTCTGTAGAAAAGTTTTGCACTAGATTTTCATTGACAATGCCGTCACTGGCAGCAAA 609984
Query 4970 AAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTT---TTTCCAGTG 5026
|||||| ||||| ||||| || ||| | || || ||||| || ||||| |
Sbjct 609983 AAACGCTAAAACTCTGGATATGAAATACCGCTCACCATCGTTAAGCTTGTAATTCCAATC 609924
Query 5027 GGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTT 5086
| |||||| |||||||| ||||| ||||||| || || || || || |||||
Sbjct 609923 ATATATATCTTTTCCTAAATCAATCTCTTCGGCAGTCCAGAAAGATGCCTCTGCCTTTTT 609864
Query 5087 GTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATC 5133
||||| |||||| ||| | |||| || |||| | |||||||
Sbjct 609863 ATACATCTGCCAAATCTCATGGTACTTGATAGGAAAAAGCACAAATC 609817
>seq10
Length=744508
Score = 318 bits (352), Expect = 5e-82
Identities = 608/888 (68%), Gaps = 17/888 (2%)
Strand=Plus/Plus
Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316
||||| || || || |||| |||||||| || || ||||| || | || ||||| |||
Sbjct 45629 TTTTGATAATCAGAGACTCTTTTTTCGAAAAAGTTGGTTTTTCCGGCCAAGGAAATGTTT 45688
Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAA----TGTTTTTCACACTTTAGAGCTAC 4372
|||||||||||||| ||||| || |||||||| |||| || || || || ||
Sbjct 45689 TCCATAAAATCAAATGGATTGGTAACGTTGTAAACCTTGTTGTT---ACCCAAG-GCGAC 45744
Query 4373 AAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAAT 4432
| ||||| ||| || ||||| | || || | ||| | || |||||| || || |
Sbjct 45745 CAACAATCTGTCGGCGCAGAATTCCACGTATTGACACATCAATTTGCAGTTCATGCCCAA 45804
Query 4433 TAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGAT 4492
|| || || | |||| || || | |||| ||| || | || ||||| |||||
Sbjct 45805 CAAGGAAACTGGCAAGGCGTCGGTAAAGTAGTCTTTTTCAATGTTGACAGCTTCGGTGAT 45864
Query 4493 TATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGC 4552
|| | | | | || |||||| || |||| |||||| || || ||
Sbjct 45865 GATTTTCTCGACAATTTCCGGGTCTGGTTTGTTCTGCAAGTGAGAAAACAACAAGCAAGC 45924
Query 4553 AAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGG 4612
||| || ||||||||||||||||||| |||| ||||||||||||||| || || ||
Sbjct 45925 AAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAATTCGTTAGAAAACGTCAAGCCCGG 45984
Query 4613 CATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCC 4672
||| |||||||| ||||| | ||| || |||| ||||| || || || ||||| |||||
Sbjct 45985 CATCAAACCTCTTTTTTTCAACCAGAAAATAGAAGCAAAAGAGCCCGAGAAGAAAATGCC 46044
Query 4673 TTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAG--CTGGCTTTGTCTTTAATC 4730
||| || || ||||| || || |||| | ||| || |||| | ||| || |||
Sbjct 46045 TTCAACAGCAGCAAAGGCAACCAATCTTTCAGCAAACAAGGCCTGG--TCGTCGTTGATC 46102
Query 4731 CATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAAT 4790
||| | || ||||||| || |||| ||| | |||||||| | || || || ||
Sbjct 46103 CATCTCAAGGCCCAGTCGGCCTTTTGCTTGATTTGTGGAATTGTCTCAATGGCATTGAAC 46162
Query 4791 AATTTACT-TTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTC 4849
|| ||| || ||||| | | ||| ||||| || | ||| || ||||
Sbjct 46163 AA-AAACTCAGACTCCTTAGGGTCCTTGACATACGTGTCAATCAATAGCGAGTATGTTTC 46221
Query 4850 AGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTG 4909
||||| ||||| || || ||||| || ||||| || | | || |||| || ||
Sbjct 46222 CGAATGGATATTCTCCATCATGATCTGGAACCCGTAGAAAAACTTGGCCTCTGGGACCTG 46281
Query 4910 AACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAA 4969
||||||| | |||| | || || ||||| ||||| || || ||||| || |||||
Sbjct 46282 AACTTCGGCAGAAAAGTTCTCCACCAAGTTCTCGTTGACAATTCCGTCCGACGCAGCAAA 46341
Query 4970 AAACGCCAAAACATGAGATATAAAGTACTGTTCG---TCAGGCTTAAGTTTTTTCCAGTG 5026
|||||||||||| |||| || || || | ||| || | | | || |||||||
Sbjct 46342 AAACGCCAAAACCCGAGAAATGAAAAACCGCTCGTTTTCCGTCAACCGGTTGTTCCAGTC 46401
Query 5027 GGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTT 5086
| ||||||| || | ||||||| || || | ||||| ||||||||||| || || ||
Sbjct 46402 GTGCAAATCCTTGGACAAATCAATCTCCTCGGCTGTCCAGAACGACGCTTCGGCCTTCTT 46461
Query 5087 GTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCT 5134
|||||| |||||| ||| | |||| || || | | ||||||||
Sbjct 46462 GTACATCTGCCAAATCTCATGGTACTTGATAGGCATCAACACAAATCT 46509
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427049370994652
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |