Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq1 183 6e-41 seq6 149 1e-30 seq4 127 4e-24 seq15 113 9e-20 >seq1 Length=3127730 Score = 183 bits (202), Expect = 6e-41 Identities = 180/230 (78%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 282871 AACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG 282930 ||||||| | || | ||| |||| || || ||| ||| ||||| ||||||||||||| Sbjct 1885221 AACCACCTCTCAATCTAAGGACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCAG 1885162 Query 282931 -CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCC 282989 |||| || | ||||| |||| |||||| || ||||| ||||| | |||||| || Sbjct 1885161 ACAAG-GTTCTACCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGT 1885103 Query 282990 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCG 283049 |||||||| ||||||||||| ||||||| || ||| | || |||||||| || | ||| Sbjct 1885102 GGAATACCTTCCTTGTCTTGAATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCA 1885043 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| | |||||| |||||||| ||||| ||||||||||| || ||||| Sbjct 1885042 ACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 1884993 Score = 176 bits (194), Expect = 9e-39 Identities = 178/229 (78%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930 |||||| | || | ||| |||| || || ||| || ||||| ||||||||||||| Sbjct 1884992 ACCACCTCTCAATCTAAGGACCAAGTGCAAAGTGGACTCCTTTTGAATGTTGTAGTCAGA 1884933 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| || | ||||| |||| |||||| || ||||| ||||| | |||||| || | Sbjct 1884932 CAAG-GTTCTACCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTG 1884874 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||||||| ||||||||||| ||||||| || ||| | || |||||||| || | ||| | Sbjct 1884873 GAATACCTTCCTTGTCTTGAATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCAA 1884814 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||| | |||||| |||||||| ||||| ||||||||||| || ||||| Sbjct 1884813 CTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 1884765 Score = 174 bits (192), Expect = 3e-38 Identities = 178/230 (77%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930 |||||| | || | ||| |||| || || ||| || ||||| ||||||||||||| Sbjct 1884764 ACCACCTCTCAATCTAAGGACCAAGTGCAAAGTGGACTCCTTTTGAATGTTGTAGTCAGA 1884705 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| || | ||||| |||| |||||| || ||||| ||||| | |||||| || | Sbjct 1884704 CAAG-GTTCTACCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTG 1884646 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||||||| ||||||||||| ||||||| || ||| | || |||||||| || | ||| | Sbjct 1884645 GAATACCTTCCTTGTCTTGAATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCAA 1884586 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 |||| | |||||| |||||||| ||||| |||||||| || || |||||| Sbjct 1884585 CTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTAACAAAGATTTGCATT 1884536 >seq6 Length=1504906 Score = 149 bits (164), Expect = 1e-30 Identities = 155/201 (77%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949 |||| || || ||| ||| ||||| || |||||||||| |||| || | |||||| || Sbjct 99679 ACCAAGTGCAAGGTGGATTCCTTTTGAATATTGTAGTCAGACAAG-GTTCTGCCATCTTC 99621 Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009 || ||| || || ||||||||||| | |||||| ||| || ||||| || |||||||| Sbjct 99620 TAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGGATACCTTCTTTGTCTTG 99561 Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069 ||||| | ||| || | || || ||||| |||| ||| ||||| | || || ||||| Sbjct 99560 AATCTTAGATTTGACATTGTCAATGGTGTCGGAAGATTCAACTTCCAAGGTAATAGTCTT 99501 Query 283070 ACCCGTCAAAGTCTTAACGAA 283090 ||| |||||||| |||||||| Sbjct 99500 ACCAGTCAAAGTTTTAACGAA 99480 >seq4 Length=1632271 Score = 127 bits (140), Expect = 4e-24 Identities = 169/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930 |||||| | || | || |||| || || ||| ||| ||||||||||||||||| | Sbjct 76480 ACCACCTCTCAATCTGAGGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGA 76539 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| || | ||| || || | || || || ||||||||||| | ||||||||| | Sbjct 76540 CAAG-GTTCTGCCGTCTTCCAACTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTG 76598 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||||||| || |||||||| ||||| | ||| || | || || |||||||| | || | Sbjct 76599 GAATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCCGAGGACTCCA 76658 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 |||| | || || || ||||| || | || || ||||| || ||||| || Sbjct 76659 CTTCCAAGGTAATGGTTTTACCGGTAAGGGTTTTGACGAAAATTTGCATCTT 76710 >seq15 Length=120988 Score = 113 bits (124), Expect = 9e-20 Identities = 176/252 (70%), Gaps = 0/252 (0%) Strand=Plus/Minus Query 316951 AAGTCAACGATAGACGTGTTAGATTCGGATCCGTCGAGGTCATGCTCAACATATGCAGTT 317010 ||||| || ||||| |||| ||| || || || | ||| ||||||||||| | ||| Sbjct 54798 AAGTCGACAATAGAGGTGTCGTCTTCAGAGCCATCAATGTCGTGCTCAACATAGACGGTT 54739 Query 317011 TTCAGAATATCCTTCGTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGT 317070 |||| || | || ||||| || || | ||| ||||| |||| || ||||||| Sbjct 54738 TTCAACTCGTCTTGGGTTGGGAATCCCTCGACCTGGCCGTTGGCAATGGCTCTCATCAAC 54679 Query 317071 GTCGACTTGCCAGCACCATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTA 317130 || || || |||||||| || || || || | ||| || || | | |||||| | Sbjct 54678 GTGGATTTACCAGCACCGTTTGGACCACACAAACCGTAACGTCTGGCTCTCTTCAAACGC 54619 Query 317131 AAACGGGTGTTGTTCAGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACAC 317190 || |||| |||||| | ||||| |||| || |||| || |||||||| | |||| Sbjct 54618 AACTGGGTTCTGTTCAACAAGATCTTGGCACCGTAAGCCAAGGAAAACTCACAGTTACAC 54559 Query 317191 AGGTCCTCGCCG 317202 | ||||||||| Sbjct 54558 AAATCCTCGCCG 54547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738609900776