Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq4 145 2e-29 seq6 123 6e-23 >seq4 Length=1632271 Score = 145 bits (160), Expect = 2e-29 Identities = 158/206 (77%), Gaps = 3/206 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| ||||| || || || ||||| || ||| | || ||||| ||| ||| Sbjct 76704 CAAATTTTCGTCAAAACCCTTACCGGTAAAACCATTACCTTGGAAGTGGAGTCCTCGGAC 76645 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || |||||| |||||||| ||||||||||| || || || ||||| ||| Sbjct 76644 ACCATTGACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATTCCACCAGACCAACAA 76585 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | ||||| || || || ||| | ||||| || || || |||| |||| || ||| | Sbjct 76584 AGATTGATCTTTGCTGGTAAGCAGTTGGAAGACGGCAGAAC-CTTGTCCGACTACAACAT 76526 Query 178103 CCAAAAAGAATCAACACTGCATCTTG 178128 |||||| ||||| || |||| |||| Sbjct 76525 CCAAAAGGAATCCACTTTGCA-CTTG 76501 >seq6 Length=1504906 Score = 123 bits (136), Expect = 6e-23 Identities = 158/215 (73%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988 |||||| |||||| | || || || || || ||| | || || ||| || |||||||| Sbjct 99479 TTTCGTTAAAACTTTGACTGGTAAGACTATTACCTTGGAAGTTGAATCTTCCGACACCAT 99538 Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048 || || |||||| |||||||| ||||||||||| ||||| || || || ||| || | Sbjct 99539 TGACAATGTCAAATCTAAGATTCAAGACAAAGAAGGTATCCCACCTGATCAACAAAGATT 99598 Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGTCCAAA 178107 ||||| || || || || | |||||||| || || |||| | || || || | |||| Sbjct 99599 GATCTTTGCTGGTAAGCAATTAGAAGATGGCAGAAC-CTTGTCTGACTACAATATTCAAA 99657 Query 178108 AAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 | ||||| || |||| | ||||||||| | ||| Sbjct 99658 AGGAATCCACCTTGCACTTGGTTTTGAGATTGAGA 99692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730521396536