Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq3 120 6e-22 >seq3 Length=2118207 Score = 120 bits (132), Expect = 6e-22 Identities = 157/212 (74%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 230428 GACGCTATTCCATGTCGCCTTATTGGC-ATGAACGCTGAACTTATGGGACAGTACATCGA 230486 |||||| | ||| ||| |||| |||| |||||||||||| | ||| | || ||| |||| Sbjct 1740718 GACGCTTTGCCA-GTCTCCTTGTTGGGTATGAACGCTGAATTGATGTGCCAATACGTCGA 1740660 Query 230487 ATTCGTAGCCGACCGCATTTTTG-TTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGA 230545 |||||| |||||| | ||| ||| |||| | ||| || |||| | |||||| || | Sbjct 1740659 ATTCGTTGCCGACAG-ATTATTGATTGCTTTGGGTAACAAGAAGATTTACAACGTCAACA 1740601 Query 230546 ACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGC 230605 |||| || | || ||||| ||| || | || ||||| ||||||||||| ||| Sbjct 1740600 ACCCATTCGACTTCATGGAAAACATCTCCTTGGCTGGTAAGACTAACTTCTTCGAGAAGA 1740541 Query 230606 GTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 | ||||||||||| || | | ||||||| ||| Sbjct 1740540 GAGTCAGTGACTACCAAAAGGCTGGTGTCATG 1740509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823742485970