Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03-
01] 19 sequences; 16,592,489 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq3 138 1e-27
>seq3
Length=2118207
Score = 138 bits (152), Expect = 1e-27
Identities = 494/758 (65%), Gaps = 22/758 (3%)
Strand=Plus/Plus
Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733
||||||| || || || | || ||||| |||||||| || || | | || || || |
Sbjct 1740523 TTTGGTAGTCACTGACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCCAAGGAGATGTTTT 1740582
Query 16734 CCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGAT 16791
||||||| || || || || | | || |||| || | | ||||| | || ||
Sbjct 1740583 CCATGAAGTCGAATGGGTTGTTGACGTTGTAAATCTTCTTGT-TACCCAAA----GCAAT 1740637
Query 16792 ---TAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTAT 16848
|||||| || || || ||||| | ||||||||||| ||||| |||||| || |
Sbjct 1740638 CAATAATCTGTCGGCAACGAATTCGACGTATTGGCACATCAATTCAGCGTTCATACCCAA 1740697
Query 16849 -AAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAA 16907
||| | || || | ||| || || || ||| |||||| || || || || | |
Sbjct 1740698 CAAGGAG-ACTGGCAAAGCGTCGGTGAAGAATTCTTGCTCGATCTTGACAGCCTCAGTGA 1740756
Query 16908 TAATACTAGCAACTCGTTCCTCGGACGGTGTATGTTT---AAGATGTTTAAACATCAGAC 16964
| || | |||| | || || | | || ||||| ||| || || | || ||
Sbjct 1740757 TGATCTTCTCAACAA-TAACTGGGTCTG-GTCTGTTTTGCAAG-TGGGAGAATAACAAAC 1740813
Query 16965 ATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACC 17024
| ||||| || |||||| || || ||||||| ||| | || || || || ||||| |
Sbjct 1740814 AGGCGAAGTCAGTATGTAAACCTTCATCTCTGCAGATCAACTCATTGGAGAAAGTCAAAC 1740873
Query 17025 CGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATA 17084
| |||||| |||| ||||||||||| || || | || || || ||| ||||| |
Sbjct 1740874 CTGGCATCAAACCTCTCTTCTTTAACCAGAAGATAGAAGCAAAAGAACCACTGAAGAAAA 1740933
Query 17085 TACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAA 17144
||||||| |||| ||||| || | ||||| ||| || || || || | || | |
Sbjct 1740934 TACCCTCAACGGCAGCAAAAGCAACTAATCTTTCACCGAACAAGGCCTCGTCGTCAGAGA 1740993
Query 17145 TCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAA 17204
||||| || |||| || || || | | ||||| || | || || || || |
Sbjct 1740994 TCCATCTCAAGGCCCAGTCAGCCTTCTTTCTGATGCATGGAATGTTGTCAATAGCATTGA 1741053
Query 17205 ATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTT 17264
| | || ||||| |||| | | || || || || | | ||| | |
Sbjct 1741054 AAAGGAAGTCAGCTTCCTTAGGGTCCTTAACGTAAGTGTCAATTAACAAAGAGTAGGTCT 1741113
Query 17265 CGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTT 17324
||||||| ||||| ||||| || || || ||||| || || |||||| | ||||
Sbjct 1741114 CGGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTT 1741173
Query 17325 GAACTTCCACGTAGAATCGTTC-CG-CTAGATTTTCGTTCACGATGCCGTCGCTCGCGGC 17382
| || || | |||| |||| || | | || ||||| || || ||||| || ||
Sbjct 1741174 GGACCTCGGCAGAGAA--GTTCTCGACCAAGTTCTCGTTGACAATACCGTCAGAGGCAGC 1741231
Query 17383 GAAAAACGCCAATATATGCTTAATGAAATATTTTTCGT 17420
||| || ||||| ||| | |||||| ||| ||||||
Sbjct 1741232 GAAGAAAGCCAAGATACGGGAAATGAAGTATCTTTCGT 1741269
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517545477082920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |