Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq3 138 1e-27 >seq3 Length=2118207 Score = 138 bits (152), Expect = 1e-27 Identities = 494/758 (65%), Gaps = 22/758 (3%) Strand=Plus/Plus Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733 ||||||| || || || | || ||||| |||||||| || || | | || || || | Sbjct 1740523 TTTGGTAGTCACTGACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCCAAGGAGATGTTTT 1740582 Query 16734 CCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGAT 16791 ||||||| || || || || | | || |||| || | | ||||| | || || Sbjct 1740583 CCATGAAGTCGAATGGGTTGTTGACGTTGTAAATCTTCTTGT-TACCCAAA----GCAAT 1740637 Query 16792 ---TAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTAT 16848 |||||| || || || ||||| | ||||||||||| ||||| |||||| || | Sbjct 1740638 CAATAATCTGTCGGCAACGAATTCGACGTATTGGCACATCAATTCAGCGTTCATACCCAA 1740697 Query 16849 -AAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAA 16907 ||| | || || | ||| || || || ||| |||||| || || || || | | Sbjct 1740698 CAAGGAG-ACTGGCAAAGCGTCGGTGAAGAATTCTTGCTCGATCTTGACAGCCTCAGTGA 1740756 Query 16908 TAATACTAGCAACTCGTTCCTCGGACGGTGTATGTTT---AAGATGTTTAAACATCAGAC 16964 | || | |||| | || || | | || ||||| ||| || || | || || Sbjct 1740757 TGATCTTCTCAACAA-TAACTGGGTCTG-GTCTGTTTTGCAAG-TGGGAGAATAACAAAC 1740813 Query 16965 ATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACC 17024 | ||||| || |||||| || || ||||||| ||| | || || || || ||||| | Sbjct 1740814 AGGCGAAGTCAGTATGTAAACCTTCATCTCTGCAGATCAACTCATTGGAGAAAGTCAAAC 1740873 Query 17025 CGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATA 17084 | |||||| |||| ||||||||||| || || | || || || ||| ||||| | Sbjct 1740874 CTGGCATCAAACCTCTCTTCTTTAACCAGAAGATAGAAGCAAAAGAACCACTGAAGAAAA 1740933 Query 17085 TACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAA 17144 ||||||| |||| ||||| || | ||||| ||| || || || || | || | | Sbjct 1740934 TACCCTCAACGGCAGCAAAAGCAACTAATCTTTCACCGAACAAGGCCTCGTCGTCAGAGA 1740993 Query 17145 TCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAA 17204 ||||| || |||| || || || | | ||||| || | || || || || | Sbjct 1740994 TCCATCTCAAGGCCCAGTCAGCCTTCTTTCTGATGCATGGAATGTTGTCAATAGCATTGA 1741053 Query 17205 ATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTT 17264 | | || ||||| |||| | | || || || || | | ||| | | Sbjct 1741054 AAAGGAAGTCAGCTTCCTTAGGGTCCTTAACGTAAGTGTCAATTAACAAAGAGTAGGTCT 1741113 Query 17265 CGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTT 17324 ||||||| ||||| ||||| || || || ||||| || || |||||| | |||| Sbjct 1741114 CGGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTT 1741173 Query 17325 GAACTTCCACGTAGAATCGTTC-CG-CTAGATTTTCGTTCACGATGCCGTCGCTCGCGGC 17382 | || || | |||| |||| || | | || ||||| || || ||||| || || Sbjct 1741174 GGACCTCGGCAGAGAA--GTTCTCGACCAAGTTCTCGTTGACAATACCGTCAGAGGCAGC 1741231 Query 17383 GAAAAACGCCAATATATGCTTAATGAAATATTTTTCGT 17420 ||| || ||||| ||| | |||||| ||| |||||| Sbjct 1741232 GAAGAAAGCCAAGATACGGGAAATGAAGTATCTTTCGT 1741269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545477082920