Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq3 140 3e-28 >seq3 Length=2118207 Score = 140 bits (154), Expect = 3e-28 Identities = 491/757 (65%), Gaps = 20/757 (3%) Strand=Plus/Plus Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971 ||||||| ||||| || | || |||||||||||||| || || | || || || |||| Sbjct 1740523 TTTGGTAGTCACTGACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCCAAGGAGATGTTTT 1740582 Query 15972 CCATAAAATCAAAGGGATTAGTAGC--TGAAAATATCTTAGAGTACCCCAGTTCCGTAAC 16029 |||| || || || || || | | || |||| ||| || |||| | | | Sbjct 1740583 CCATGAAGTCGAATGGGTTGTTGACGTTGTAAAT--CTTCTTGTTACCCAAAGCAATCAA 1740640 Query 16030 TAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTAT-AA 16088 |||||| || || || ||||| | ||||| ||||| || || || || || | || Sbjct 1740641 TAATCTGTCGGCAACGAATTCGACGTATTGGCACATCAATTCAGCGTTCATACCCAACAA 1740700 Query 16089 GTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGA 16148 | | || || | ||| | || || |||| ||| || ||| || || || | |||| Sbjct 1740701 GGAG-ACTGGCAAAGCGTCGGTGAAGAATTCTTGCTCGATCTTGACAGCCTCAGTGATGA 1740759 Query 16149 TATCGGTGGCTCGTGTTTCAGACGGT---GTATGGTTT--AGGTGTTTAAACATTAGACA 16203 | | ||| | | ||| || || ||| | ||| || | | ||| Sbjct 1740760 TCTT-----CTCAACAATAACTGGGTCTGGTCTGTTTTGCAAGTGGGAGAATAACAAACA 1740814 Query 16204 CGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCC 16263 |||||||| ||||| ||||| ||||||| ||| | || ||||| ||||| || || Sbjct 1740815 GGCGAAGTCAGTATGTAAACCTTCATCTCTGCAGATCAACTCATTGGAGAAAGTCAAACC 1740874 Query 16264 TGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATAT 16323 |||||| |||| |||||||||||||| || | |||||| || || ||||| || Sbjct 1740875 TGGCATCAAACCTCTCTTCTTTAACCAGAAGATAGAAGCAAAAGAACCACTGAAGAAAAT 1740934 Query 16324 ACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAAT 16383 ||||||||| | |||||||| | ||||| ||| || || || || | | | || Sbjct 1740935 ACCCTCAACGGCAGCAAAAGCAACTAATCTTTCACCGAACAAGGCCTCGTCGTCAGAGAT 1740994 Query 16384 CCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAA 16443 |||| || |||| || || || | | | || || || | || || || || || Sbjct 1740995 CCATCTCAAGGCCCAGTCAGCCTTCTTTCTGATGCATGGAATGTTGTCAATAGCATTGAA 1741054 Query 16444 CAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTC 16503 | || ||||| | || | | || || ||||| | ||| ||| | || Sbjct 1741055 AAGGAAGTCAGCTTCCTTAGGGTCCTTAACGTAAGTGTCAATTAACAAAGAGTAGGTCTC 1741114 Query 16504 TGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTG 16563 ||||| ||||| || || || || || || ||||| || || || | ||||| Sbjct 1741115 GGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTG 1741174 Query 16564 TACTTCCACGTAAAATCGTTC-CG-CCAGGTTCTCATTCACGATACCGTCACTTGCAGCA 16621 || || | | || |||| || ||| |||||| || || ||||||||| ||||| Sbjct 1741175 GACCTCGGCAGAGAA--GTTCTCGACCAAGTTCTCGTTGACAATACCGTCAGAGGCAGCG 1741232 Query 16622 AAAAACGCCAATATGTGCTTAATGAAATATTTTTCGT 16658 || || ||||| || | |||||| ||| |||||| Sbjct 1741233 AAGAAAGCCAAGATACGGGAAATGAAGTATCTTTCGT 1741269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511414278539080