Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 4e-13 >seq1 Length=3149860 Score = 89.7 bits (98), Expect = 4e-13 Identities = 124/171 (73%), Gaps = 2/171 (1%) Strand=Plus/Plus Query 101655 TAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTGAGCAT 101714 ||||||||| || || ||| || || ||||| |||||||| | ||| | || |||| Sbjct 1358383 TAGGAGTTCTTGTAAATTGCTCCTTGAGTGCATCTATGTGATCCAAATACACATGTGCAT 1358442 Query 101715 CTCCTATAGTATGGATAAACTCTCCAGGCACTAGAT-TAGTGACATGAGCAATCATGCAA 101773 |||| | || ||||| ||||| ||| | | || || | | || || ||||| | Sbjct 1358443 CTCCCAATGTGTGGATGAACTCACCACAGTCCATATCTACT-ATGTGCGCTATCATCTTA 1358501 Query 101774 GTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCA 101824 |||||||||| ||| ||||||||||||||| || || || ||||| ||| Sbjct 1358502 GTTAAAAGAGCGTAGGAAGCAATGTTAAATGGAACACCCAATCCCATGTCA 1358552 Score = 82.4 bits (90), Expect = 6e-11 Identities = 191/283 (67%), Gaps = 4/283 (1%) Strand=Plus/Plus Query 101882 AATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATT 101941 || || ||||| || ||||| |||| || || ||||| ||||||||| |||| Sbjct 1358667 AAGACGTGACATGGTGGCAAAGCCATCTTGCCAAAGTCTGGTGGATTCCAAGCGGACATG 1358726 Query 101942 AACATCCTTCTATCTGTAGGGTTT-GTTTTTATAGTATCAATCAACTGTTTTAATTGGTC 102000 | || ||||| || ||| || || || |||| | | || | | || || ||||| Sbjct 1358727 ATAATTCTTCTGTC-GTATGGATTCGTCTTTAACTTCTTGATGACATCTTGCAACTGGTC 1358785 Query 102001 AACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCA 102060 || ||||| || | || || || | | || ||||| ||||||||||| ||||| Sbjct 1358786 AAATCCTTGACCGGTGTAGTCTGTGTCACAATCCTTGTATTCAGCTCCGAAATGTCTCCA 1358845 Query 102061 CTGAAATCCATACACAGGTCCAAGATCTCCTTCATCT-CTGTCATAAAAACCAAGTTTAT 102119 || ||||| || || ||||| | ||| ||||| ||| | |||| ||||| | || | Sbjct 1358846 TTGGAATCCGTAAACTGGTCCCAAATCACCTTC-TCTACGGTCAGTCAAACCCAACTTGT 1358904 Query 102120 CTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCC 102162 | || || | |||||| || | ||||| || | ||||| Sbjct 1358905 CCAAGAACTCACGAGATCCGTTTCCTTCCCAGATCTTTACGCC 1358947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361251116347769