Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03-
01] 19 sequences; 16,592,489 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq1 89.7 4e-13
>seq1
Length=3149860
Score = 89.7 bits (98), Expect = 4e-13
Identities = 124/171 (73%), Gaps = 2/171 (1%)
Strand=Plus/Plus
Query 101655 TAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTGAGCAT 101714
||||||||| || || ||| || || ||||| |||||||| | ||| | || ||||
Sbjct 1358383 TAGGAGTTCTTGTAAATTGCTCCTTGAGTGCATCTATGTGATCCAAATACACATGTGCAT 1358442
Query 101715 CTCCTATAGTATGGATAAACTCTCCAGGCACTAGAT-TAGTGACATGAGCAATCATGCAA 101773
|||| | || ||||| ||||| ||| | | || || | | || || ||||| |
Sbjct 1358443 CTCCCAATGTGTGGATGAACTCACCACAGTCCATATCTACT-ATGTGCGCTATCATCTTA 1358501
Query 101774 GTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCA 101824
|||||||||| ||| ||||||||||||||| || || || ||||| |||
Sbjct 1358502 GTTAAAAGAGCGTAGGAAGCAATGTTAAATGGAACACCCAATCCCATGTCA 1358552
Score = 82.4 bits (90), Expect = 6e-11
Identities = 191/283 (67%), Gaps = 4/283 (1%)
Strand=Plus/Plus
Query 101882 AATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATT 101941
|| || ||||| || ||||| |||| || || ||||| ||||||||| ||||
Sbjct 1358667 AAGACGTGACATGGTGGCAAAGCCATCTTGCCAAAGTCTGGTGGATTCCAAGCGGACATG 1358726
Query 101942 AACATCCTTCTATCTGTAGGGTTT-GTTTTTATAGTATCAATCAACTGTTTTAATTGGTC 102000
| || ||||| || ||| || || || |||| | | || | | || || |||||
Sbjct 1358727 ATAATTCTTCTGTC-GTATGGATTCGTCTTTAACTTCTTGATGACATCTTGCAACTGGTC 1358785
Query 102001 AACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCA 102060
|| ||||| || | || || || | | || ||||| ||||||||||| |||||
Sbjct 1358786 AAATCCTTGACCGGTGTAGTCTGTGTCACAATCCTTGTATTCAGCTCCGAAATGTCTCCA 1358845
Query 102061 CTGAAATCCATACACAGGTCCAAGATCTCCTTCATCT-CTGTCATAAAAACCAAGTTTAT 102119
|| ||||| || || ||||| | ||| ||||| ||| | |||| ||||| | || |
Sbjct 1358846 TTGGAATCCGTAAACTGGTCCCAAATCACCTTC-TCTACGGTCAGTCAAACCCAACTTGT 1358904
Query 102120 CTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCC 102162
| || || | |||||| || | ||||| || | |||||
Sbjct 1358905 CCAAGAACTCACGAGATCCGTTTCCTTCCCAGATCTTTACGCC 1358947
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361251116347769
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |