Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq9 91.5 1e-13 seq3 82.4 6e-11 >seq9 Length=507287 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093 ||||||||| ||| | || ||||| || || || ||||||||| ||| || | | Sbjct 283033 AATGCAAATCTTCGTTAAGACATTAACCGGTAAGACCATTACCTTGGAAGTTGAGTCTTC 282974 Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153 || || | | | | ||||| || || || || |||||| | || ||| || Sbjct 282973 CGATACCATTGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCA 282914 Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213 ||| | | ||||| || || || ||||||||||| | |||| | | || ||||| Sbjct 282913 ACAGCGTTTAATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTCTTTCTGACTACAA 282854 Query 25214 TATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || ||||||||||| ||||||||| |||| ||| |||| |||| || Sbjct 282853 CATCCAAAAGGAATCCACTCTTCACTTGGTTTTAAGATTGAGAGGTGG 282806 Score = 84.2 bits (92), Expect = 2e-11 Identities = 153/227 (67%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| | || || ||||| || || |||||||| || ||| | | Sbjct 282348 ATGCAAATCTTCGTYAAGACTTTGACTGGTAAGACCATTACTCTTGARGTTGAATCTTCT 282289 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | | | ||| || || || || |||||| | || ||| ||| Sbjct 282288 GACACYATTGACAACGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCTCCAGAYCAA 282229 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 |||||| | || || || || || ||||| ||||| | |||| | | || ||||| Sbjct 282228 CAAAGATTGATTTTCGCCGGTAAGCAATTAGAAGACGGTAGAACTCTTTCTGACTACAAC 282169 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || ||||||||||| ||||||||| | || || |||| |||| || Sbjct 282168 ATCCAAAAGGAATCCACTCTTCACTTAGTTTTRAGATTGAGAGGTGG 282122 >seq3 Length=2118207 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091 ||||||||||| ||| |||| || || || || || ||||||||| ||| || || Sbjct 53213 AAAATGCAAATTTTCGTCAAGACTTTAACAGGTAAGACCATTACCTTGGAAGTCGAGTCC 53272 Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151 | || || | | | || ||||| || || || || |||||| | || || Sbjct 53273 TCCGACACCATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGTATTCCACCTGAC 53332 Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211 ||||||||| | ||||| || || || || |||||||| | ||| | | || ||| Sbjct 53333 CAACAAAGATTGATCTTCGCTGGTAAGCAGTTGGAAGACGGTAGAACCCTTTCTGACTAC 53392 Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || || || ||||| || || | ||| |||| ||| |||| |||| || Sbjct 53393 AACATCCAGAAGGAGTCCACCTTGCACTTGGTCTTAAGATTGAGAGGTGG 53442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410796704874866