Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1 123 2e-23 >seq1 Length=3149860 Score = 123 bits (136), Expect = 2e-23 Identities = 215/305 (70%), Gaps = 6/305 (2%) Strand=Plus/Minus Query 20140 GAAAAAGGAGTTAAGATTTGGAGCGCACATGGATCTAAGCAATTTTTACACAGCAATGGA 20199 |||||||| || ||||| ||| | | | |||||| | || || ||| ||| Sbjct 1358953 GAAAAAGGCGTAAAGATCTGGGAAGGAAACGGATCTCGTGAGTTCTTGGACAAGT-TGGG 1358895 Query 20200 TTTGACA-ACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTT 20258 |||||| ||||| ||| || |||||||| || || || ||||| |||||||||||||| Sbjct 1358894 TTTGACTGACCGTAGAGAAGGTGATTTGGGACCAGTTTACGGATTCCAATGGAGACATTT 1358835 Query 20259 TGGAGCTGAATATGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACA 20318 ||||||||||| || ||||| | || || |||||| | || || || || Sbjct 1358834 CGGAGCTGAATACAAGGATTGTGACACAGACTACACCGGTCAAGGATTTGACCAGTTGCA 1358775 Query 20319 AAATGTTATTAATTTAATTAAA-ACGAACCCAAACGACAGAAGAATTATTTTATGCGCCT 20377 | |||| || || | ||||| ||||| ||| |||||||||||||||| | | ||| | Sbjct 1358774 AGATGTCATCAA-GAAGTTAAAGACGAATCCATACGACAGAAGAATTATCATGTCCGCTT 1358716 Query 20378 GGAACGCTAAAGA-TGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTT 20436 |||| | ||| | || | ||||||||||| |||||||| | | ||||| || Sbjct 1358715 GGAATCCACCAGACTTTGGC-AAGATGGCTTTGCCACCATGTCACGTCTTCTGCCAGTTC 1358657 Query 20437 TACGT 20441 ||||| Sbjct 1358656 TACGT 1358652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399183907563955