Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq3 158 1e-33 >seq3 Length=2118207 Score = 158 bits (174), Expect = 1e-33 Identities = 479/731 (66%), Gaps = 12/731 (2%) Strand=Plus/Plus Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972 ||||| || ||||| ||||| || || ||||||||||| ||||| ||| || || ||| Sbjct 1740522 TTTTGGTAGTCACTGACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCCAAGGAGATGTTT 1740581 Query 13973 TCCATAAAATCAAATGGATTTGTTGACATAAACACT-TTATCACAACCTAGTTCTAATAG 14031 ||||| || || ||||| || |||||| | | | || | ||| | | | | Sbjct 1740582 TCCATGAAGTCGAATGGGTT-GTTGACGTTGTAAATCTTCTTGTTACCCAAAGCAATCAA 1740640 Query 14032 TAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 14091 |||||| || |||| ||| || | ||||| |||| || ||| |||||||| | | Sbjct 1740641 TAATCTGTCGGCAACGAATTCGACGTATTGGCACATCAATTCAGCGTTCATACCCAACAA 1740700 Query 14092 TTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAAT 14151 || || | | ||| || ||||||| || || |||||||| | || || Sbjct 1740701 GGAGACTGGCAAAGCGTCGGTGAAGAATTCTTGCTCGATCTTGACAGCCTCAGTGATGAT 1740760 Query 14152 AATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTA--AACACGCA 14209 || || ||| | | | | | |||| | || | ||| | |||| || Sbjct 1740761 CTTCTCAACAATAAC--TGGGTCTGGTCTGTTTTGCAAGTGGGAGAATAACAAACAGGCG 1740818 Query 14210 AAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGC 14269 || ||| ||| | || |||||||| | || | || || || || || || |||||| Sbjct 1740819 AAGTCAGTATGTAAACCTTCATCTCTGCAGATCAACTCATTGGAGAAAGTCAAACCTGGC 1740878 Query 14270 ATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCC 14329 ||||| |||| || |||||||| || || | ||| || || || ||||| || ||| Sbjct 1740879 ATCAAACCTCTCTTCTTTAACCAGAAGATAGAAGCAAAAGAACCACTGAAGAAAATACCC 1740938 Query 14330 TCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCAT 14389 ||||| |||||||| || | ||||| ||| || ||| | || | | || || |||||| Sbjct 1740939 TCAACGGCAGCAAAAGCAACTAATCTTTCACCGAACAAGGCCTCGTCGTCAGAGATCCAT 1740998 Query 14390 TTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTT-TCAATAGCATT--AAAT 14446 | ||||| |||| || ||| | || || | |||| ||||||||||| ||| Sbjct 1740999 CTCAAGGCCCAGTCAGCCTTCTTTCTGAT-GCATGGAATGTTGTCAATAGCATTGAAAAG 1741057 Query 14447 AAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCA 14506 || |||| | || ||| || ||| || ||||| | || || | || Sbjct 1741058 GAAGTCAGCTTCCTTAGGGTCCTT--AACGTAAGTGTCAATTAACAAAGAGTAGGTCTCG 1741115 Query 14507 GAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGT 14566 ||||| ||||||||||| || || ||||| || ||||| | ||||||| ||| Sbjct 1741116 GAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGG 1741175 Query 14567 ACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAA 14626 ||||| | | || | ||| |||| || || || || ||||| ||| || || || Sbjct 1741176 ACCTCGGCAGAGAAGTTCTCGACCAAGTTCTCGTTGACAATACCGTCAGAGGCAGCGAAG 1741235 Query 14627 AATGCCAATAT 14637 || ||||| || Sbjct 1741236 AAAGCCAAGAT 1741246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482345485442920