Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03-
01] 19 sequences; 16,592,489 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq3 158 1e-33
>seq3
Length=2118207
Score = 158 bits (174), Expect = 1e-33
Identities = 479/731 (66%), Gaps = 12/731 (2%)
Strand=Plus/Plus
Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972
||||| || ||||| ||||| || || ||||||||||| ||||| ||| || || |||
Sbjct 1740522 TTTTGGTAGTCACTGACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCCAAGGAGATGTTT 1740581
Query 13973 TCCATAAAATCAAATGGATTTGTTGACATAAACACT-TTATCACAACCTAGTTCTAATAG 14031
||||| || || ||||| || |||||| | | | || | ||| | | | |
Sbjct 1740582 TCCATGAAGTCGAATGGGTT-GTTGACGTTGTAAATCTTCTTGTTACCCAAAGCAATCAA 1740640
Query 14032 TAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 14091
|||||| || |||| ||| || | ||||| |||| || ||| |||||||| | |
Sbjct 1740641 TAATCTGTCGGCAACGAATTCGACGTATTGGCACATCAATTCAGCGTTCATACCCAACAA 1740700
Query 14092 TTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAAT 14151
|| || | | ||| || ||||||| || || |||||||| | || ||
Sbjct 1740701 GGAGACTGGCAAAGCGTCGGTGAAGAATTCTTGCTCGATCTTGACAGCCTCAGTGATGAT 1740760
Query 14152 AATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTA--AACACGCA 14209
|| || ||| | | | | | |||| | || | ||| | |||| ||
Sbjct 1740761 CTTCTCAACAATAAC--TGGGTCTGGTCTGTTTTGCAAGTGGGAGAATAACAAACAGGCG 1740818
Query 14210 AAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGC 14269
|| ||| ||| | || |||||||| | || | || || || || || || ||||||
Sbjct 1740819 AAGTCAGTATGTAAACCTTCATCTCTGCAGATCAACTCATTGGAGAAAGTCAAACCTGGC 1740878
Query 14270 ATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCC 14329
||||| |||| || |||||||| || || | ||| || || || ||||| || |||
Sbjct 1740879 ATCAAACCTCTCTTCTTTAACCAGAAGATAGAAGCAAAAGAACCACTGAAGAAAATACCC 1740938
Query 14330 TCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCAT 14389
||||| |||||||| || | ||||| ||| || ||| | || | | || || ||||||
Sbjct 1740939 TCAACGGCAGCAAAAGCAACTAATCTTTCACCGAACAAGGCCTCGTCGTCAGAGATCCAT 1740998
Query 14390 TTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTT-TCAATAGCATT--AAAT 14446
| ||||| |||| || ||| | || || | |||| ||||||||||| |||
Sbjct 1740999 CTCAAGGCCCAGTCAGCCTTCTTTCTGAT-GCATGGAATGTTGTCAATAGCATTGAAAAG 1741057
Query 14447 AAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCA 14506
|| |||| | || ||| || ||| || ||||| | || || | ||
Sbjct 1741058 GAAGTCAGCTTCCTTAGGGTCCTT--AACGTAAGTGTCAATTAACAAAGAGTAGGTCTCG 1741115
Query 14507 GAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGT 14566
||||| ||||||||||| || || ||||| || ||||| | ||||||| |||
Sbjct 1741116 GAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGG 1741175
Query 14567 ACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAA 14626
||||| | | || | ||| |||| || || || || ||||| ||| || || ||
Sbjct 1741176 ACCTCGGCAGAGAAGTTCTCGACCAAGTTCTCGTTGACAATACCGTCAGAGGCAGCGAAG 1741235
Query 14627 AATGCCAATAT 14637
|| ||||| ||
Sbjct 1741236 AAAGCCAAGAT 1741246
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482345485442920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |